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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182269080
OHUC01003029
406043
Verrucomicrobiota
GCA
Cys
>WENV182269164
OHUC01009309
148006
Verrucomicrobiota
CAA
Leu
>WENV182269212
OHUC01015729
101600
Verrucomicrobiota
AAG
Leu
>WENV182269156
OHUC01008942
293105
Verrucomicrobiota
CAT
Met
>WENV182269056
OHUC01001967
405901
Verrucomicrobiota
GCC
Gly
>WENV182269023
OHUC01001186
483642
Verrucomicrobiota
CCC
Gly
>WENV182269128
OHUC01006777
229220
Verrucomicrobiota
CAT
Met
>WENV182269028
OHUC01001262
8960
Verrucomicrobiota
CGA
Ser
>WENV182269003
OHUC01000872
101463
Verrucomicrobiota
TAA
Leu
>WENV182269152
OHUC01008701
157427
Verrucomicrobiota
GTC
Asp
>WENV182269205
OHUC01014068
293079
Verrucomicrobiota
CGC
Ala
>WENV182269004
OHUC01000872
292636
Verrucomicrobiota
>WENV182269022
OHUC01001186
489412
Verrucomicrobiota
TCC
Gly
>WENV182269081
OHUC01003029
298263
Verrucomicrobiota
TTC
Glu
>WENV182269259
OHUC01026162
406336
Verrucomicrobiota
CCT
Arg
>WENV182269063
OHUC01002196
406369
Verrucomicrobiota
CCG
Arg
>WENV182269051
OHUC01001823
405940
Verrucomicrobiota
GGT
Thr
>WENV182269174
OHUC01009821
406044
Verrucomicrobiota
CTG
Gln
>WENV182269151
OHUC01008687
187556
Verrucomicrobiota
GGG
Pro
>WENV182269052
OHUC01001824
406037
Verrucomicrobiota
GTG
His
>WENV182269089
OHUC01003327
406360
Verrucomicrobiota
GAC
Val
>WENV182269084
OHUC01003165
187548
Verrucomicrobiota
TCT
Arg
>WENV182269043
OHUC01001492
406040
Verrucomicrobiota
CGT
Thr
>WENV182269180
OHUC01010675
406039
Verrucomicrobiota
CAC
Val
>WENV182268964
OHUC01000422
75458
Verrucomicrobiota
CAG
Leu
>WENV182269096
OHUC01003975
406368
Verrucomicrobiota
TTG
Gln
>WENV182268985
OHUC01000682
21159
Verrucomicrobiota
GGA
Ser
>WENV182269047
OHUC01001574
101461
Verrucomicrobiota
GTA
Tyr
>WENV182269041
OHUC01001470
293095
Verrucomicrobiota
TTT
Lys
>WENV182269038
OHUC01001351
187561
Verrucomicrobiota
CGG
Pro
>WENV182269019
OHUC01001067
303305
Verrucomicrobiota
GGC
Ala
>WENV182269143
OHUC01008000
406346
Verrucomicrobiota
TAC
Val
>WENV182269027
OHUC01001243
8938
Verrucomicrobiota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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