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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182272544
OHUH01010301
99852
Bacillota
GTA
Tyr
>WENV182272536
OHUH01008488
405363
Bacillota
GCA
Cys
>WENV182272338
OHUH01000019
291579
Bacillota
GAA
Phe
>WENV182272476
OHUH01002799
285945
Bacillota
TTT
Lys
>WENV182272337
OHUH01000019
179917
Bacillota
CAT
Met
>WENV182272358
OHUH01000050
280492
Bacillota
CTT
Lys
>WENV182272425
OHUH01000436
175842
Bacillota
CAC
Val
>WENV182272532
OHUH01007544
179176
Bacillota
ACG
Arg
>WENV182272499
OHUH01004813
295166
Bacillota
TGC
Ala
>WENV182272454
OHUH01001331
295166
Bacillota
TGC
Ala
>WENV182272320
OHUH01000012
73664
Bacillota
CAG
Leu
>WENV182272374
OHUH01000082
280447
Bacillota
GAC
Val
>WENV182272384
OHUH01000097
5692
Bacillota
GCT
Ser
>WENV182272370
OHUH01000077
291581
Bacillota
CGG
Pro
>WENV182272473
OHUH01002590
175859
Bacillota
TCT
Arg
>WENV182272407
OHUH01000257
175831
Bacillota
ACG
Arg
>WENV182272330
OHUH01000017
294020
Bacillota
TAC
Val
>WENV182272475
OHUH01002799
282730
Bacillota
TAC
Val
>WENV182272369
OHUH01000077
480322
Bacillota
CTG
Gln
>WENV182272448
OHUH01001069
175868
Bacillota
GTT
Asn
>WENV182272352
OHUH01000034
175868
Bacillota
GTT
Asn
>WENV182272494
OHUH01004315
403659
Bacillota
TTC
Glu
>WENV182272447
OHUH01001069
398854
Bacillota
CTC
Glu
>WENV182272396
OHUH01000161
291576
Bacillota
CCC
Gly
>WENV182272373
OHUH01000081
480324
Bacillota
TTG
Gln
>WENV182272319
OHUH01000012
56079
Bacillota
AAG
Leu
>WENV182272318
OHUH01000012
56079
Bacillota
AAG
Leu
>WENV182272412
OHUH01000319
404126
Bacillota
GCC
Gly
>WENV182272365
OHUH01000059
117745
Bacillota
GTA
Tyr
>WENV182272387
OHUH01000098
280444
Bacillota
GGT
Thr
>WENV182272378
OHUH01000086
280444
Bacillota
GGT
Thr
>WENV182272361
OHUH01000055
46643
Bacillota
TGA
Ser
>WENV182272434
OHUH01000609
179755
Bacillota
CCG
Arg
>WENV182272400
OHUH01000193
398832
Bacillota
TTC
Glu
>WENV182272376
OHUH01000084
280462
Bacillota
GAA
Phe
>WENV182272349
OHUH01000021
398852
Bacillota
CTC
Glu
>WENV182272410
OHUH01000300
398852
Bacillota
CTC
Glu
>WENV182272389
OHUH01000118
398852
Bacillota
CTC
Glu
>WENV182272355
OHUH01000040
398852
Bacillota
CTC
Glu
>WENV182272415
OHUH01000339
184539
Bacillota
TCT
Arg
>WENV182272514
OHUH01005411
280483
Bacillota
GAA
Phe
>WENV182272515
OHUH01005411
285756
Bacillota
GCC
Gly
>WENV182272421
OHUH01000381
398833
Bacillota
TGT
Thr
>WENV182272386
OHUH01000098
175849
Bacillota
GTC
Asp
>WENV182272377
OHUH01000084
280463
Bacillota
TTT
Lys
>WENV182272383
OHUH01000097
56074
Bacillota
TGA
Ser
>WENV182272411
OHUH01000301
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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