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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182280478
OHUY01000515
343590
Bacillota
GCC
Gly
>WENV182280541
OHUY01001518
343590
Bacillota
GCC
Gly
>WENV182280555
OHUY01001940
349107
Bacillota
GCC
Gly
>WENV182280556
OHUY01001940
405363
Bacillota
GCA
Cys
>WENV182280554
OHUY01001940
280428
Bacillota
GAA
Phe
>WENV182280406
OHUY01000082
280492
Bacillota
CTT
Lys
>WENV182280411
OHUY01000093
280492
Bacillota
CTT
Lys
>WENV182280782
OHUY01012301
175842
Bacillota
CAC
Val
>WENV182280805
OHUY01014238
236579
Bacillota
GAT
Ile
>WENV182281023
OHUY01049557
348419
Bacillota
GTT
Asn
>WENV182280768
OHUY01011123
179176
Bacillota
ACG
Arg
>WENV182280804
OHUY01014238
295166
Bacillota
TGC
Ala
>WENV182280858
OHUY01019254
141334
Bacillota
TAG
Leu
>WENV182280495
OHUY01000740
73664
Bacillota
CAG
Leu
>WENV182280482
OHUY01000550
73664
Bacillota
CAG
Leu
>WENV182280390
OHUY01000043
73664
Bacillota
CAG
Leu
>WENV182280578
OHUY01002530
280447
Bacillota
GAC
Val
>WENV182280634
OHUY01004552
5692
Bacillota
GCT
Ser
>WENV182280595
OHUY01003027
73009
Bacillota
CAG
Leu
>WENV182280632
OHUY01004459
291581
Bacillota
CGG
Pro
>WENV182280877
OHUY01021132
175859
Bacillota
TCT
Arg
>WENV182280876
OHUY01021105
175831
Bacillota
ACG
Arg
>WENV182280493
OHUY01000727
187589
Bacillota
CAT
Met
>WENV182280706
OHUY01007832
480322
Bacillota
CTG
Gln
>WENV182280631
OHUY01004459
480322
Bacillota
CTG
Gln
>WENV182280625
OHUY01004215
175868
Bacillota
GTT
Asn
>WENV182280624
OHUY01004215
398854
Bacillota
CTC
Glu
>WENV182280883
OHUY01021778
291576
Bacillota
CCC
Gly
>WENV182280802
OHUY01014168
480324
Bacillota
TTG
Gln
>WENV182280414
OHUY01000095
56079
Bacillota
AAG
Leu
>WENV182280480
OHUY01000548
204381
Bacillota
GAT
Ile
>WENV182280418
OHUY01000106
117745
Bacillota
GTA
Tyr
>WENV182280585
OHUY01002694
280444
Bacillota
GGT
Thr
>WENV182280905
OHUY01026777
317482
Bacillota
TAC
Val
>WENV182280678
OHUY01006684
483485
Bacillota
CCC
Gly
>WENV182280454
OHUY01000324
46643
Bacillota
TGA
Ser
>WENV182280605
OHUY01003370
179755
Bacillota
CCG
Arg
>WENV182280786
OHUY01012745
58120
Bacillota
AAG
Leu
>WENV182280779
OHUY01012075
46835
Bacillota
TAA
Leu
>WENV182280935
OHUY01030860
332651
Bacillota
GTT
Asn
>WENV182280429
OHUY01000168
280462
Bacillota
GAA
Phe
>WENV182280453
OHUY01000313
398852
Bacillota
CTC
Glu
>WENV182280451
OHUY01000290
398852
Bacillota
CTC
Glu
>WENV182280432
OHUY01000173
398852
Bacillota
CTC
Glu
>WENV182280378
OHUY01000034
398852
Bacillota
CTC
Glu
>WENV182280880
OHUY01021434
285601
Bacillota
TTC
Glu
>WENV182280653
OHUY01005614
175857
Bacillota
GTG
His
>WENV182280388
OHUY01000040
285756
Bacillota
GCC
Gly
>WENV182280742
OHUY01009809
398833
Bacillota
TGT
Thr
>WENV182280870
OHUY01020293
175849
Bacillota
GTC
Asp
>WENV182280430
OHUY01000168
280463
Bacillota
TTT
Lys
>WENV182280633
OHUY01004552
56074
Bacillota
TGA
Ser
>WENV182280829
OHUY01015947
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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