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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182281031
OHUY01052073
117741
Bacteroidota
TAG
Leu
>WENV182280692
OHUY01007060
398829
Bacteroidota
CCT
Arg
>WENV182280771
OHUY01011473
280557
Bacteroidota
CAT
Met
>WENV182280806
OHUY01014479
201819
Bacteroidota
CAT
Met
>WENV182280959
OHUY01034719
178571
Bacteroidota
GTT
Asn
>WENV182280832
OHUY01016639
56385
Bacteroidota
TGA
Ser
>WENV182280787
OHUY01012785
20449
Bacteroidota
GGA
Ser
>WENV182280651
OHUY01005580
56072
Bacteroidota
TAA
Leu
>WENV182280825
OHUY01015663
175902
Bacteroidota
GGC
Ala
>WENV182280712
OHUY01008179
283315
Bacteroidota
CGT
Thr
>WENV182280942
OHUY01031783
156128
Bacteroidota
GGG
Pro
>WENV182280583
OHUY01002655
280451
Bacteroidota
CGT
Thr
>WENV182280626
OHUY01004223
488746
Bacteroidota
CTG
Gln
>WENV182280951
OHUY01033993
178134
Bacteroidota
TGG
Pro
>WENV182280721
OHUY01008301
398828
Bacteroidota
CCG
Arg
>WENV182280709
OHUY01008049
481044
Bacteroidota
>WENV182280575
OHUY01002390
280446
Bacteroidota
TTT
Lys
>WENV182280621
OHUY01003841
484496
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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