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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182296969
OHWG01052450
406043
Verrucomicrobiota
GCA
Cys
>WENV182296876
OHWG01033542
405901
Verrucomicrobiota
GCC
Gly
>WENV182296950
OHWG01047264
229220
Verrucomicrobiota
CAT
Met
>WENV182296903
OHWG01036773
101463
Verrucomicrobiota
TAA
Leu
>WENV182296849
OHWG01028266
120352
Verrucomicrobiota
TAG
Leu
>WENV182296981
OHWG01057302
298263
Verrucomicrobiota
TTC
Glu
>WENV182296873
OHWG01032702
406369
Verrucomicrobiota
CCG
Arg
>WENV182296833
OHWG01026483
57652
Verrucomicrobiota
TGA
Ser
>WENV182296733
OHWG01014915
75458
Verrucomicrobiota
CAG
Leu
>WENV182296780
OHWG01019680
21159
Verrucomicrobiota
GGA
Ser
>WENV182296796
OHWG01022348
406351
Verrucomicrobiota
GTT
Asn
>WENV182296989
OHWG01060020
8938
Verrucomicrobiota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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