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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182302484
OHWS01033332
280500
Bacillota
TGC
Ala
>WENV182302086
OHWS01000327
349107
Bacillota
GCC
Gly
>WENV182302211
OHWS01002032
229015
Bacillota
GTG
His
>WENV182301983
OHWS01000040
280492
Bacillota
CTT
Lys
>WENV182302027
OHWS01000135
280492
Bacillota
CTT
Lys
>WENV182302373
OHWS01011496
175842
Bacillota
CAC
Val
>WENV182302367
OHWS01010467
179176
Bacillota
ACG
Arg
>WENV182302428
OHWS01019171
404079
Bacillota
CAT
Met
>WENV182302171
OHWS01001233
190476
Bacillota
CAT
Met
>WENV182301993
OHWS01000056
73664
Bacillota
CAG
Leu
>WENV182301988
OHWS01000045
73664
Bacillota
CAG
Leu
>WENV182302198
OHWS01001683
280447
Bacillota
GAC
Val
>WENV182302119
OHWS01000637
5692
Bacillota
GCT
Ser
>WENV182302152
OHWS01000895
73009
Bacillota
CAG
Leu
>WENV182302251
OHWS01003270
481217
Bacillota
GCA
Cys
>WENV182302100
OHWS01000487
291581
Bacillota
CGG
Pro
>WENV182302135
OHWS01000791
175859
Bacillota
TCT
Arg
>WENV182302173
OHWS01001254
175831
Bacillota
ACG
Arg
>WENV182302099
OHWS01000487
480322
Bacillota
CTG
Gln
>WENV182302212
OHWS01002032
401685
Bacillota
TTG
Gln
>WENV182302112
OHWS01000573
175868
Bacillota
GTT
Asn
>WENV182302253
OHWS01003347
322848
Bacillota
CTT
Lys
>WENV182302111
OHWS01000573
398854
Bacillota
CTC
Glu
>WENV182302071
OHWS01000235
291576
Bacillota
CCC
Gly
>WENV182302327
OHWS01007394
480324
Bacillota
TTG
Gln
>WENV182302026
OHWS01000132
480324
Bacillota
TTG
Gln
>WENV182302131
OHWS01000761
497729
Bacillota
CCA
Trp
>WENV182302299
OHWS01005175
303718
Bacillota
TGT
Thr
>WENV182302190
OHWS01001503
303718
Bacillota
TGT
Thr
>WENV182302025
OHWS01000131
117745
Bacillota
GTA
Tyr
>WENV182302047
OHWS01000174
280444
Bacillota
GGT
Thr
>WENV182302127
OHWS01000712
46643
Bacillota
TGA
Ser
>WENV182302221
OHWS01002137
179755
Bacillota
CCG
Arg
>WENV182302332
OHWS01007607
46835
Bacillota
TAA
Leu
>WENV182302172
OHWS01001233
398832
Bacillota
TTC
Glu
>WENV182302024
OHWS01000125
118669
Bacillota
GTA
Tyr
>WENV182302469
OHWS01030141
294275
Bacillota
TGC
Ala
>WENV182301991
OHWS01000050
280462
Bacillota
GAA
Phe
>WENV182302066
OHWS01000217
398852
Bacillota
CTC
Glu
>WENV182301990
OHWS01000048
398852
Bacillota
CTC
Glu
>WENV182301954
OHWS01000011
398852
Bacillota
CTC
Glu
>WENV182301953
OHWS01000011
398852
Bacillota
CTC
Glu
>WENV182301952
OHWS01000011
398852
Bacillota
CTC
Glu
>WENV182302461
OHWS01028320
406186
Bacillota
CTC
Glu
>WENV182302008
OHWS01000093
175857
Bacillota
GTG
His
>WENV182302165
OHWS01001102
398833
Bacillota
TGT
Thr
>WENV182302223
OHWS01002248
175849
Bacillota
GTC
Asp
>WENV182302010
OHWS01000093
280463
Bacillota
TTT
Lys
>WENV182302118
OHWS01000637
56074
Bacillota
TGA
Ser
>WENV182302065
OHWS01000214
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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