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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182309623
OHXK01005233
175883
Actinomycetota
GAT
Ile
>WENV182309605
OHXK01004630
175907
Actinomycetota
TAC
Val
>WENV182309591
OHXK01004096
280503
Actinomycetota
CCT
Arg
>WENV182309736
OHXK01011606
56083
Actinomycetota
CGA
Ser
>WENV182309762
OHXK01013680
140768
Actinomycetota
TAG
Leu
>WENV182309938
OHXK01039452
176075
Actinomycetota
TCT
Arg
>WENV182309846
OHXK01023266
20208
Actinomycetota
GAG
Leu
>WENV182309741
OHXK01012004
482604
Actinomycetota
TTG
Gln
>WENV182309876
OHXK01028366
59689
Actinomycetota
GGA
Ser
>WENV182309750
OHXK01012400
175837
Actinomycetota
ACG
Arg
>WENV182309786
OHXK01016093
280549
Actinomycetota
CAC
Val
>WENV182309573
OHXK01003435
398843
Actinomycetota
GTT
Asn
>WENV182309785
OHXK01016093
434162
Actinomycetota
GAC
Val
>WENV182309526
OHXK01002526
176077
Actinomycetota
CAT
Met
>WENV182309717
OHXK01010292
298224
Actinomycetota
GGC
Ala
>WENV182309911
OHXK01032191
481719
Actinomycetota
GCA
Cys
>WENV182309880
OHXK01028514
398948
Actinomycetota
TTC
Glu
>WENV182309609
OHXK01004673
291585
Actinomycetota
GCC
Gly
>WENV182309886
OHXK01029146
150272
Actinomycetota
TAA
Leu
>WENV182309960
OHXK01047936
117777
Actinomycetota
>WENV182309753
OHXK01012653
191955
Actinomycetota
TGT
Thr
>WENV182309796
OHXK01017200
280544
Actinomycetota
GTG
His
>WENV182309523
OHXK01002387
280536
Actinomycetota
CTT
Lys
>WENV182309365
OHXK01000639
175926
Actinomycetota
CAT
Met
>WENV182309747
OHXK01012167
483206
Actinomycetota
CTG
Gln
>WENV182309701
OHXK01009105
104211
Actinomycetota
CAG
Leu
>WENV182309615
OHXK01004881
430848
Actinomycetota
CTG
Gln
>WENV182309614
OHXK01004881
289788
Actinomycetota
CTC
Glu
>WENV182309604
OHXK01004514
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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