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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182309729
OHXK01011260
406350
Verrucomicrobiota
TGT
Thr
>WENV182309941
OHXK01039872
293105
Verrucomicrobiota
CAT
Met
>WENV182309898
OHXK01030639
405901
Verrucomicrobiota
GCC
Gly
>WENV182309957
OHXK01046598
229220
Verrucomicrobiota
CAT
Met
>WENV182309961
OHXK01048134
489412
Verrucomicrobiota
TCC
Gly
>WENV182309864
OHXK01027255
298263
Verrucomicrobiota
TTC
Glu
>WENV182309905
OHXK01031982
406360
Verrucomicrobiota
GAC
Val
>WENV182309773
OHXK01015135
406368
Verrucomicrobiota
TTG
Gln
>WENV182309794
OHXK01017003
293095
Verrucomicrobiota
TTT
Lys
>WENV182309897
OHXK01030342
8938
Verrucomicrobiota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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