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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182339272
OIAB01004947
405363
Bacillota
GCA
Cys
>WENV182339140
OIAB01000189
280428
Bacillota
GAA
Phe
>WENV182339264
OIAB01004291
291579
Bacillota
GAA
Phe
>WENV182339034
OIAB01000003
280492
Bacillota
CTT
Lys
>WENV182339092
OIAB01000067
280492
Bacillota
CTT
Lys
>WENV182339271
OIAB01004802
175842
Bacillota
CAC
Val
>WENV182339232
OIAB01001515
179176
Bacillota
ACG
Arg
>WENV182339194
OIAB01000746
190476
Bacillota
CAT
Met
>WENV182339228
OIAB01001479
82124
Bacillota
TAA
Leu
>WENV182339041
OIAB01000004
73664
Bacillota
CAG
Leu
>WENV182339230
OIAB01001486
5692
Bacillota
GCT
Ser
>WENV182339280
OIAB01005904
186123
Bacillota
GTC
Asp
>WENV182339204
OIAB01001000
73009
Bacillota
CAG
Leu
>WENV182339176
OIAB01000462
291581
Bacillota
CGG
Pro
>WENV182339173
OIAB01000456
175831
Bacillota
ACG
Arg
>WENV182339227
OIAB01001479
294020
Bacillota
TAC
Val
>WENV182339175
OIAB01000462
480322
Bacillota
CTG
Gln
>WENV182339206
OIAB01001024
175868
Bacillota
GTT
Asn
>WENV182339215
OIAB01001349
322848
Bacillota
CTT
Lys
>WENV182339214
OIAB01001349
398854
Bacillota
CTC
Glu
>WENV182339248
OIAB01002634
291576
Bacillota
CCC
Gly
>WENV182339212
OIAB01001325
480324
Bacillota
TTG
Gln
>WENV182339126
OIAB01000159
175899
Bacillota
GTC
Asp
>WENV182339040
OIAB01000004
56079
Bacillota
AAG
Leu
>WENV182339039
OIAB01000004
56079
Bacillota
AAG
Leu
>WENV182339116
OIAB01000137
117745
Bacillota
GTA
Tyr
>WENV182339042
OIAB01000005
117745
Bacillota
GTA
Tyr
>WENV182339261
OIAB01004193
280444
Bacillota
GGT
Thr
>WENV182339065
OIAB01000029
46643
Bacillota
TGA
Ser
>WENV182339141
OIAB01000189
321753
Bacillota
GCC
Gly
>WENV182339174
OIAB01000460
179755
Bacillota
CCG
Arg
>WENV182339122
OIAB01000152
179755
Bacillota
CCG
Arg
>WENV182339195
OIAB01000746
398832
Bacillota
TTC
Glu
>WENV182339262
OIAB01004291
118669
Bacillota
GTA
Tyr
>WENV182339118
OIAB01000137
280462
Bacillota
GAA
Phe
>WENV182339098
OIAB01000088
280462
Bacillota
GAA
Phe
>WENV182339103
OIAB01000108
398852
Bacillota
CTC
Glu
>WENV182339068
OIAB01000038
398852
Bacillota
CTC
Glu
>WENV182339030
OIAB01000001
398852
Bacillota
CTC
Glu
>WENV182339359
OIAB01018702
201856
Bacillota
GAT
Ile
>WENV182339072
OIAB01000039
175857
Bacillota
GTG
His
>WENV182339291
OIAB01006597
285756
Bacillota
GCC
Gly
>WENV182339207
OIAB01001061
398833
Bacillota
TGT
Thr
>WENV182339119
OIAB01000137
280463
Bacillota
TTT
Lys
>WENV182339074
OIAB01000039
280463
Bacillota
TTT
Lys
>WENV182339281
OIAB01005904
405393
Bacillota
GCC
Gly
>WENV182339229
OIAB01001486
56074
Bacillota
TGA
Ser
>WENV182339270
OIAB01004744
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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