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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182342008
OIAG01016089
175883
Actinomycetota
GAT
Ile
>WENV182341989
OIAG01013939
175907
Actinomycetota
TAC
Val
>WENV182341659
OIAG01001446
280503
Actinomycetota
CCT
Arg
>WENV182342100
OIAG01029914
140768
Actinomycetota
TAG
Leu
>WENV182342150
OIAG01039572
176075
Actinomycetota
TCT
Arg
>WENV182342109
OIAG01031363
20208
Actinomycetota
GAG
Leu
>WENV182342026
OIAG01017717
482604
Actinomycetota
TTG
Gln
>WENV182341947
OIAG01011367
175837
Actinomycetota
ACG
Arg
>WENV182341997
OIAG01015412
29393
Actinomycetota
GCT
Ser
>WENV182341786
OIAG01003915
349164
Actinomycetota
CTC
Glu
>WENV182342058
OIAG01022891
280702
Actinomycetota
GGC
Ala
>WENV182341839
OIAG01005717
398843
Actinomycetota
GTT
Asn
>WENV182342064
OIAG01023063
434162
Actinomycetota
GAC
Val
>WENV182341908
OIAG01008670
280524
Actinomycetota
TGC
Ala
>WENV182342144
OIAG01038199
398948
Actinomycetota
TTC
Glu
>WENV182341817
OIAG01004653
291585
Actinomycetota
GCC
Gly
>WENV182342159
OIAG01041328
117777
Actinomycetota
>WENV182341791
OIAG01004106
175949
Actinomycetota
CAT
Met
>WENV182341955
OIAG01012016
191955
Actinomycetota
TGT
Thr
>WENV182342119
OIAG01032623
280544
Actinomycetota
GTG
His
>WENV182341756
OIAG01003388
280536
Actinomycetota
CTT
Lys
>WENV182341549
OIAG01000537
175926
Actinomycetota
CAT
Met
>WENV182342128
OIAG01034116
483206
Actinomycetota
CTG
Gln
>WENV182341925
OIAG01009470
46642
Actinomycetota
CGA
Ser
>WENV182342006
OIAG01015953
104211
Actinomycetota
CAG
Leu
>WENV182341787
OIAG01003915
430848
Actinomycetota
CTG
Gln
>WENV182341907
OIAG01008670
179238
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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