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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182342565
OIAH01009053
99852
Bacillota
GTA
Tyr
>WENV182342375
OIAH01000726
405363
Bacillota
GCA
Cys
>WENV182342592
OIAH01011547
487050
Bacillota
TCC
Gly
>WENV182342418
OIAH01001318
280428
Bacillota
GAA
Phe
>WENV182342608
OIAH01012946
291579
Bacillota
GAA
Phe
>WENV182342252
OIAH01000073
280492
Bacillota
CTT
Lys
>WENV182342204
OIAH01000009
280492
Bacillota
CTT
Lys
>WENV182342546
OIAH01007178
175842
Bacillota
CAC
Val
>WENV182342666
OIAH01023815
184497
Bacillota
GGG
Pro
>WENV182342528
OIAH01006138
179176
Bacillota
ACG
Arg
>WENV182342256
OIAH01000080
73664
Bacillota
CAG
Leu
>WENV182342181
OIAH01000002
73664
Bacillota
CAG
Leu
>WENV182342575
OIAH01009678
280447
Bacillota
GAC
Val
>WENV182342479
OIAH01003666
280447
Bacillota
GAC
Val
>WENV182342340
OIAH01000535
280447
Bacillota
GAC
Val
>WENV182342487
OIAH01004049
5692
Bacillota
GCT
Ser
>WENV182342410
OIAH01001236
5692
Bacillota
GCT
Ser
>WENV182342538
OIAH01006717
186123
Bacillota
GTC
Asp
>WENV182342442
OIAH01001949
73009
Bacillota
CAG
Leu
>WENV182342287
OIAH01000219
73009
Bacillota
CAG
Leu
>WENV182342719
OIAH01043077
481217
Bacillota
GCA
Cys
>WENV182342397
OIAH01001033
291581
Bacillota
CGG
Pro
>WENV182342264
OIAH01000109
291581
Bacillota
CGG
Pro
>WENV182342424
OIAH01001479
175859
Bacillota
TCT
Arg
>WENV182342413
OIAH01001285
175859
Bacillota
TCT
Arg
>WENV182342388
OIAH01000949
175859
Bacillota
TCT
Arg
>WENV182342246
OIAH01000071
175847
Bacillota
GTC
Asp
>WENV182342315
OIAH01000350
175831
Bacillota
ACG
Arg
>WENV182342298
OIAH01000290
179810
Bacillota
TCT
Arg
>WENV182342247
OIAH01000071
294020
Bacillota
TAC
Val
>WENV182342471
OIAH01003138
480322
Bacillota
CTG
Gln
>WENV182342396
OIAH01001033
480322
Bacillota
CTG
Gln
>WENV182342263
OIAH01000109
480322
Bacillota
CTG
Gln
>WENV182342343
OIAH01000548
187364
Bacillota
CAT
Met
>WENV182342328
OIAH01000396
175868
Bacillota
GTT
Asn
>WENV182342327
OIAH01000385
291576
Bacillota
CCC
Gly
>WENV182342572
OIAH01009540
480324
Bacillota
TTG
Gln
>WENV182342374
OIAH01000726
480324
Bacillota
TTG
Gln
>WENV182342180
OIAH01000002
56079
Bacillota
AAG
Leu
>WENV182342179
OIAH01000002
56079
Bacillota
AAG
Leu
>WENV182342685
OIAH01028854
398857
Bacillota
TTC
Glu
>WENV182342259
OIAH01000090
117745
Bacillota
GTA
Tyr
>WENV182342498
OIAH01004557
280444
Bacillota
GGT
Thr
>WENV182342349
OIAH01000567
280444
Bacillota
GGT
Thr
>WENV182342346
OIAH01000567
280444
Bacillota
GGT
Thr
>WENV182342217
OIAH01000016
483485
Bacillota
CCC
Gly
>WENV182342221
OIAH01000018
46643
Bacillota
TGA
Ser
>WENV182342405
OIAH01001218
179755
Bacillota
CCG
Arg
>WENV182342269
OIAH01000136
398832
Bacillota
TTC
Glu
>WENV182342350
OIAH01000569
118669
Bacillota
GTA
Tyr
>WENV182342218
OIAH01000018
280462
Bacillota
GAA
Phe
>WENV182342293
OIAH01000244
398852
Bacillota
CTC
Glu
>WENV182342285
OIAH01000206
398852
Bacillota
CTC
Glu
>WENV182342222
OIAH01000020
398852
Bacillota
CTC
Glu
>WENV182342394
OIAH01001020
309916
Bacillota
TTT
Lys
>WENV182342212
OIAH01000013
280483
Bacillota
GAA
Phe
>WENV182342223
OIAH01000023
406186
Bacillota
CTC
Glu
>WENV182342717
OIAH01042362
285601
Bacillota
TTC
Glu
>WENV182342299
OIAH01000290
175857
Bacillota
GTG
His
>WENV182342213
OIAH01000013
285756
Bacillota
GCC
Gly
>WENV182342341
OIAH01000537
398833
Bacillota
TGT
Thr
>WENV182342497
OIAH01004557
175849
Bacillota
GTC
Asp
>WENV182342348
OIAH01000567
175849
Bacillota
GTC
Asp
>WENV182342301
OIAH01000290
280463
Bacillota
TTT
Lys
>WENV182342539
OIAH01006717
405393
Bacillota
GCC
Gly
>WENV182342486
OIAH01004049
56074
Bacillota
TGA
Ser
>WENV182342409
OIAH01001236
56074
Bacillota
TGA
Ser
>WENV182342493
OIAH01004409
280473
Bacillota
TGG
Pro
>WENV182342429
OIAH01001565
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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