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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182344246
OIAL01006316
99852
Bacillota
GTA
Tyr
>WENV182344334
OIAL01012351
405363
Bacillota
GCA
Cys
>WENV182344021
OIAL01000798
280428
Bacillota
GAA
Phe
>WENV182344261
OIAL01007164
291579
Bacillota
GAA
Phe
>WENV182344296
OIAL01008914
179917
Bacillota
CAT
Met
>WENV182343933
OIAL01000262
280492
Bacillota
CTT
Lys
>WENV182343904
OIAL01000177
280492
Bacillota
CTT
Lys
>WENV182344226
OIAL01005397
175842
Bacillota
CAC
Val
>WENV182344406
OIAL01018333
184497
Bacillota
GGG
Pro
>WENV182344564
OIAL01049286
176018
Bacillota
CAT
Met
>WENV182344310
OIAL01010339
179563
Bacillota
GAT
Ile
>WENV182344055
OIAL01001155
190476
Bacillota
CAT
Met
>WENV182344011
OIAL01000661
73664
Bacillota
CAG
Leu
>WENV182344340
OIAL01013537
280447
Bacillota
GAC
Val
>WENV182344012
OIAL01000662
280447
Bacillota
GAC
Val
>WENV182344106
OIAL01002056
5692
Bacillota
GCT
Ser
>WENV182344069
OIAL01001361
73009
Bacillota
CAG
Leu
>WENV182344196
OIAL01004716
481217
Bacillota
GCA
Cys
>WENV182344096
OIAL01001797
291581
Bacillota
CGG
Pro
>WENV182344285
OIAL01008405
175859
Bacillota
TCT
Arg
>WENV182344513
OIAL01038464
175831
Bacillota
ACG
Arg
>WENV182344095
OIAL01001797
480322
Bacillota
CTG
Gln
>WENV182344248
OIAL01006332
175868
Bacillota
GTT
Asn
>WENV182344413
OIAL01019318
322848
Bacillota
CTT
Lys
>WENV182344412
OIAL01019318
398854
Bacillota
CTC
Glu
>WENV182344174
OIAL01004025
291576
Bacillota
CCC
Gly
>WENV182344553
OIAL01047828
480324
Bacillota
TTG
Gln
>WENV182344394
OIAL01017272
497729
Bacillota
CCA
Trp
>WENV182344108
OIAL01002123
497729
Bacillota
CCA
Trp
>WENV182344154
OIAL01003298
175899
Bacillota
GTC
Asp
>WENV182343987
OIAL01000463
56079
Bacillota
AAG
Leu
>WENV182344274
OIAL01007784
292374
Bacillota
TGC
Ala
>WENV182343851
OIAL01000077
117745
Bacillota
GTA
Tyr
>WENV182344101
OIAL01001936
280444
Bacillota
GGT
Thr
>WENV182344098
OIAL01001936
280444
Bacillota
GGT
Thr
>WENV182344034
OIAL01000904
46643
Bacillota
TGA
Ser
>WENV182344126
OIAL01002624
179755
Bacillota
CCG
Arg
>WENV182344054
OIAL01001151
179755
Bacillota
CCG
Arg
>WENV182344254
OIAL01006758
58120
Bacillota
AAG
Leu
>WENV182344056
OIAL01001155
398832
Bacillota
TTC
Glu
>WENV182343973
OIAL01000368
118669
Bacillota
GTA
Tyr
>WENV182344006
OIAL01000600
398852
Bacillota
CTC
Glu
>WENV182343792
OIAL01000014
398852
Bacillota
CTC
Glu
>WENV182344273
OIAL01007784
201856
Bacillota
GAT
Ile
>WENV182343786
OIAL01000009
280483
Bacillota
GAA
Phe
>WENV182344083
OIAL01001633
175857
Bacillota
GTG
His
>WENV182343787
OIAL01000009
285756
Bacillota
GCC
Gly
>WENV182344100
OIAL01001936
175849
Bacillota
GTC
Asp
>WENV182344105
OIAL01002056
56074
Bacillota
TGA
Ser
>WENV182344193
OIAL01004628
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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