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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182344989
OIAM01015909
343590
Bacillota
GCC
Gly
>WENV182344816
OIAM01000414
349107
Bacillota
GCC
Gly
>WENV182344887
OIAM01001509
405363
Bacillota
GCA
Cys
>WENV182344815
OIAM01000414
280428
Bacillota
GAA
Phe
>WENV182344978
OIAM01011436
285945
Bacillota
TTT
Lys
>WENV182344682
OIAM01000049
280492
Bacillota
CTT
Lys
>WENV182344619
OIAM01000008
280492
Bacillota
CTT
Lys
>WENV182344863
OIAM01000875
175842
Bacillota
CAC
Val
>WENV182344851
OIAM01000756
175842
Bacillota
CAC
Val
>WENV182344839
OIAM01000666
190476
Bacillota
CAT
Met
>WENV182344780
OIAM01000232
190476
Bacillota
CAT
Met
>WENV182344633
OIAM01000011
73664
Bacillota
CAG
Leu
>WENV182344699
OIAM01000068
73009
Bacillota
CAG
Leu
>WENV182344805
OIAM01000345
291581
Bacillota
CGG
Pro
>WENV182344891
OIAM01002018
175859
Bacillota
TCT
Arg
>WENV182344759
OIAM01000186
175859
Bacillota
TCT
Arg
>WENV182344868
OIAM01000972
175831
Bacillota
ACG
Arg
>WENV182344804
OIAM01000345
480322
Bacillota
CTG
Gln
>WENV182344767
OIAM01000201
480322
Bacillota
CTG
Gln
>WENV182344813
OIAM01000396
175868
Bacillota
GTT
Asn
>WENV182344857
OIAM01000809
322848
Bacillota
CTT
Lys
>WENV182344856
OIAM01000809
398854
Bacillota
CTC
Glu
>WENV182344812
OIAM01000393
291576
Bacillota
CCC
Gly
>WENV182344785
OIAM01000296
480324
Bacillota
TTG
Gln
>WENV182344632
OIAM01000011
56079
Bacillota
AAG
Leu
>WENV182344631
OIAM01000011
56079
Bacillota
AAG
Leu
>WENV182344628
OIAM01000009
404126
Bacillota
GCC
Gly
>WENV182344729
OIAM01000102
117745
Bacillota
GTA
Tyr
>WENV182344928
OIAM01004901
280444
Bacillota
GGT
Thr
>WENV182344860
OIAM01000815
280444
Bacillota
GGT
Thr
>WENV182344848
OIAM01000716
280444
Bacillota
GGT
Thr
>WENV182344949
OIAM01006747
317482
Bacillota
TAC
Val
>WENV182344667
OIAM01000034
46643
Bacillota
TGA
Ser
>WENV182344979
OIAM01011436
294385
Bacillota
TGT
Thr
>WENV182344700
OIAM01000068
179755
Bacillota
CCG
Arg
>WENV182344840
OIAM01000666
398832
Bacillota
TTC
Glu
>WENV182344781
OIAM01000232
398832
Bacillota
TTC
Glu
>WENV182344668
OIAM01000034
280462
Bacillota
GAA
Phe
>WENV182344838
OIAM01000649
398852
Bacillota
CTC
Glu
>WENV182344827
OIAM01000489
398852
Bacillota
CTC
Glu
>WENV182344606
OIAM01000005
398852
Bacillota
CTC
Glu
>WENV182344603
OIAM01000003
398852
Bacillota
CTC
Glu
>WENV182344803
OIAM01000336
184539
Bacillota
TCT
Arg
>WENV182344708
OIAM01000072
398833
Bacillota
TGT
Thr
>WENV182344927
OIAM01004901
175849
Bacillota
GTC
Asp
>WENV182344859
OIAM01000815
175849
Bacillota
GTC
Asp
>WENV182344792
OIAM01000306
280463
Bacillota
TTT
Lys
>WENV182344888
OIAM01001512
56074
Bacillota
TGA
Ser
>WENV182344855
OIAM01000793
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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