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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182362589
OICE01000031
398829
Bacteroidota
CCT
Arg
>WENV182362748
OICE01000618
175838
Bacteroidota
GTT
Asn
>WENV182362749
OICE01000618
175838
Bacteroidota
GTT
Asn
>WENV182362970
OICE01011437
404226
Bacteroidota
CCT
Arg
>WENV182362581
OICE01000017
400161
Bacteroidota
GGT
Thr
>WENV182362672
OICE01000157
156422
Bacteroidota
TAC
Val
>WENV182362673
OICE01000157
156422
Bacteroidota
TAC
Val
>WENV182362930
OICE01006932
280557
Bacteroidota
CAT
Met
>WENV182362680
OICE01000201
20206
Bacteroidota
GGA
Ser
>WENV182363015
OICE01018371
398871
Bacteroidota
TTC
Glu
>WENV182362595
OICE01000039
118221
Bacteroidota
CAA
Leu
>WENV182362697
OICE01000242
175903
Bacteroidota
GTG
His
>WENV182362934
OICE01007098
351598
Bacteroidota
CGG
Pro
>WENV182362630
OICE01000058
56385
Bacteroidota
TGA
Ser
>WENV182362629
OICE01000058
56385
Bacteroidota
TGA
Ser
>WENV182362582
OICE01000017
312035
Bacteroidota
CCA
Trp
>WENV182362781
OICE01000991
242241
Bacteroidota
GTC
Asp
>WENV182362803
OICE01001261
175902
Bacteroidota
GGC
Ala
>WENV182362735
OICE01000504
99847
Bacteroidota
GTA
Tyr
>WENV182362984
OICE01013385
399200
Bacteroidota
CAT
Met
>WENV182362652
OICE01000102
404109
Bacteroidota
CTC
Glu
>WENV182362650
OICE01000102
404109
Bacteroidota
CTC
Glu
>WENV182362649
OICE01000102
404109
Bacteroidota
CTC
Glu
>WENV182362723
OICE01000370
46648
Bacteroidota
TAA
Leu
>WENV182362822
OICE01001603
488746
Bacteroidota
CTG
Gln
>WENV182363049
OICE01025790
280478
Bacteroidota
GCC
Gly
>WENV182362674
OICE01000160
398828
Bacteroidota
CCG
Arg
>WENV182362583
OICE01000020
481328
Bacteroidota
TTG
Gln
>WENV182362754
OICE01000643
69204
Bacteroidota
TGA
Ser
>WENV182362876
OICE01003706
484496
Bacteroidota
TTG
Gln
>WENV182362909
OICE01005842
27502
Bacteroidota
GGA
Ser
>WENV182362903
OICE01005110
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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