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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182367695
OICL01058796
179231
Actinomycetota
TAC
Val
>WENV182366628
OICL01000026
175883
Actinomycetota
GAT
Ile
>WENV182367535
OICL01027719
280498
Actinomycetota
GTT
Asn
>WENV182366689
OICL01000103
280503
Actinomycetota
CCT
Arg
>WENV182366876
OICL01000788
398843
Actinomycetota
GTT
Asn
>WENV182366741
OICL01000185
241064
Actinomycetota
CTC
Glu
>WENV182366756
OICL01000243
241064
Actinomycetota
CTC
Glu
>WENV182367617
OICL01039445
176638
Actinomycetota
GGG
Pro
>WENV182367699
OICL01060015
280524
Actinomycetota
TGC
Ala
>WENV182366681
OICL01000091
291585
Actinomycetota
GCC
Gly
>WENV182366712
OICL01000127
280536
Actinomycetota
CTT
Lys
>WENV182366629
OICL01000026
175926
Actinomycetota
CAT
Met
>WENV182367558
OICL01031281
323758
Actinomycetota
CGT
Thr
>WENV182366740
OICL01000185
483206
Actinomycetota
CTG
Gln
>WENV182367610
OICL01038252
175882
Actinomycetota
TGG
Pro
>WENV182367521
OICL01025609
20209
Actinomycetota
GAG
Leu
>WENV182367707
OICL01061987
480319
Actinomycetota
TTG
Gln
>WENV182367570
OICL01032246
398853
Actinomycetota
CTG
Gln
>WENV182367548
OICL01029751
46642
Actinomycetota
CGA
Ser
>WENV182367698
OICL01060015
179238
Actinomycetota
GAT
Ile
>WENV182367564
OICL01031795
147796
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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