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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182374296
OIDB01000063
400161
Bacteroidota
GGT
Thr
>WENV182374561
OIDB01005026
400161
Bacteroidota
GGT
Thr
>WENV182374270
OIDB01000021
118221
Bacteroidota
CAA
Leu
>WENV182374660
OIDB01017086
175936
Bacteroidota
CAT
Met
>WENV182374286
OIDB01000046
56385
Bacteroidota
TGA
Ser
>WENV182374353
OIDB01000248
56385
Bacteroidota
TGA
Ser
>WENV182374649
OIDB01015092
182267
Bacteroidota
GTT
Asn
>WENV182374297
OIDB01000063
312035
Bacteroidota
CCA
Trp
>WENV182374304
OIDB01000076
156128
Bacteroidota
GGG
Pro
>WENV182374306
OIDB01000082
404109
Bacteroidota
CTC
Glu
>WENV182374415
OIDB01000810
46648
Bacteroidota
TAA
Leu
>WENV182374411
OIDB01000709
178134
Bacteroidota
TGG
Pro
>WENV182374461
OIDB01001500
118220
Bacteroidota
GTA
Tyr
>WENV182374307
OIDB01000085
481044
Bacteroidota
>WENV182374257
OIDB01000008
481328
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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