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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182378406
OIDK01001802
179231
Actinomycetota
TAC
Val
>WENV182378299
OIDK01000338
176499
Actinomycetota
CAT
Met
>WENV182378576
OIDK01014071
175883
Actinomycetota
GAT
Ile
>WENV182378479
OIDK01004601
175907
Actinomycetota
TAC
Val
>WENV182378419
OIDK01002230
280498
Actinomycetota
GTT
Asn
>WENV182378519
OIDK01007763
280503
Actinomycetota
CCT
Arg
>WENV182378512
OIDK01007283
295964
Actinomycetota
GTT
Asn
>WENV182378451
OIDK01003109
56083
Actinomycetota
CGA
Ser
>WENV182378296
OIDK01000322
140768
Actinomycetota
TAG
Leu
>WENV182378449
OIDK01003045
482604
Actinomycetota
TTG
Gln
>WENV182378529
OIDK01008319
175837
Actinomycetota
ACG
Arg
>WENV182378597
OIDK01016789
29393
Actinomycetota
GCT
Ser
>WENV182378583
OIDK01014611
21508
Actinomycetota
GAG
Leu
>WENV182378478
OIDK01004554
241064
Actinomycetota
CTC
Glu
>WENV182378443
OIDK01002703
280524
Actinomycetota
TGC
Ala
>WENV182378504
OIDK01006113
481719
Actinomycetota
GCA
Cys
>WENV182378482
OIDK01004716
398948
Actinomycetota
TTC
Glu
>WENV182378503
OIDK01006113
291585
Actinomycetota
GCC
Gly
>WENV182378423
OIDK01002330
150272
Actinomycetota
TAA
Leu
>WENV182378444
OIDK01002703
280523
Actinomycetota
GGC
Ala
>WENV182378279
OIDK01000191
175841
Actinomycetota
TAT
Ile
>WENV182378282
OIDK01000236
20205
Actinomycetota
GCT
Ser
>WENV182378464
OIDK01003807
175926
Actinomycetota
CAT
Met
>WENV182378480
OIDK01004627
358727
Actinomycetota
CCG
Arg
>WENV182378312
OIDK01000398
480329
Actinomycetota
CCC
Gly
>WENV182378477
OIDK01004554
483206
Actinomycetota
CTG
Gln
>WENV182378447
OIDK01002943
175882
Actinomycetota
TGG
Pro
>WENV182378411
OIDK01002078
280489
Actinomycetota
CTC
Glu
>WENV182378363
OIDK01000951
280499
Actinomycetota
CCT
Arg
>WENV182378412
OIDK01002078
398853
Actinomycetota
CTG
Gln
>WENV182378328
OIDK01000500
398853
Actinomycetota
CTG
Gln
>WENV182378373
OIDK01001037
175843
Actinomycetota
CAA
Leu
>WENV182378367
OIDK01000991
203883
Actinomycetota
TCT
Arg
>WENV182378337
OIDK01000637
46642
Actinomycetota
CGA
Ser
>WENV182378311
OIDK01000398
104211
Actinomycetota
CAG
Leu
>WENV182378298
OIDK01000338
117903
Actinomycetota
GTA
Tyr
>WENV182378404
OIDK01001747
56071
Actinomycetota
TGA
Ser
>WENV182378359
OIDK01000927
147796
Actinomycetota
TAA
Leu
>WENV182378295
OIDK01000322
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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