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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182379652
OIDM01005217
343590
Bacillota
GCC
Gly
>WENV182379765
OIDM01017843
343590
Bacillota
GCC
Gly
>WENV182379534
OIDM01000941
290391
Bacillota
TAC
Val
>WENV182379402
OIDM01000086
280492
Bacillota
CTT
Lys
>WENV182379504
OIDM01000509
280492
Bacillota
CTT
Lys
>WENV182379635
OIDM01004526
175842
Bacillota
CAC
Val
>WENV182379489
OIDM01000423
348419
Bacillota
GTT
Asn
>WENV182379460
OIDM01000232
184497
Bacillota
GGG
Pro
>WENV182379334
OIDM01000016
179176
Bacillota
ACG
Arg
>WENV182379542
OIDM01001064
73664
Bacillota
CAG
Leu
>WENV182379358
OIDM01000029
73664
Bacillota
CAG
Leu
>WENV182379531
OIDM01000872
280447
Bacillota
GAC
Val
>WENV182379693
OIDM01008122
73009
Bacillota
CAG
Leu
>WENV182379505
OIDM01000515
481217
Bacillota
GCA
Cys
>WENV182379633
OIDM01004202
175831
Bacillota
ACG
Arg
>WENV182379605
OIDM01003216
187589
Bacillota
CAT
Met
>WENV182379661
OIDM01006033
284627
Bacillota
GAA
Phe
>WENV182379412
OIDM01000094
401685
Bacillota
TTG
Gln
>WENV182379623
OIDM01003619
322848
Bacillota
CTT
Lys
>WENV182379622
OIDM01003619
398854
Bacillota
CTC
Glu
>WENV182379771
OIDM01019143
480324
Bacillota
TTG
Gln
>WENV182379462
OIDM01000239
497729
Bacillota
CCA
Trp
>WENV182379456
OIDM01000221
497729
Bacillota
CCA
Trp
>WENV182379573
OIDM01001684
303718
Bacillota
TGT
Thr
>WENV182379720
OIDM01009595
73638
Bacillota
AAG
Leu
>WENV182379357
OIDM01000029
56079
Bacillota
AAG
Leu
>WENV182379673
OIDM01007408
398857
Bacillota
TTC
Glu
>WENV182379376
OIDM01000041
117745
Bacillota
GTA
Tyr
>WENV182379418
OIDM01000106
46643
Bacillota
TGA
Ser
>WENV182379637
OIDM01004551
179755
Bacillota
CCG
Arg
>WENV182379502
OIDM01000485
58120
Bacillota
AAG
Leu
>WENV182379435
OIDM01000143
58120
Bacillota
AAG
Leu
>WENV182379662
OIDM01006224
46835
Bacillota
TAA
Leu
>WENV182379520
OIDM01000713
330413
Bacillota
CTT
Lys
>WENV182379615
OIDM01003382
398832
Bacillota
TTC
Glu
>WENV182379584
OIDM01002131
332651
Bacillota
GTT
Asn
>WENV182379399
OIDM01000080
280462
Bacillota
GAA
Phe
>WENV182379417
OIDM01000104
398852
Bacillota
CTC
Glu
>WENV182379377
OIDM01000041
398852
Bacillota
CTC
Glu
>WENV182379372
OIDM01000037
398852
Bacillota
CTC
Glu
>WENV182379521
OIDM01000724
118359
Bacillota
GTA
Tyr
>WENV182379796
OIDM01026250
201856
Bacillota
GAT
Ile
>WENV182379315
OIDM01000004
280483
Bacillota
GAA
Phe
>WENV182379411
OIDM01000094
175857
Bacillota
GTG
His
>WENV182379316
OIDM01000004
285756
Bacillota
GCC
Gly
>WENV182379687
OIDM01007823
317820
Bacillota
TAC
Val
>WENV182379524
OIDM01000738
280463
Bacillota
TTT
Lys
>WENV182379625
OIDM01003899
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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