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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182382019
OIDR01006619
176499
Actinomycetota
CAT
Met
>WENV182381932
OIDR01001404
175883
Actinomycetota
GAT
Ile
>WENV182381958
OIDR01001886
280498
Actinomycetota
GTT
Asn
>WENV182381880
OIDR01000582
280503
Actinomycetota
CCT
Arg
>WENV182381920
OIDR01001155
56083
Actinomycetota
CGA
Ser
>WENV182381930
OIDR01001394
140768
Actinomycetota
TAG
Leu
>WENV182381916
OIDR01001051
140768
Actinomycetota
TAG
Leu
>WENV182382058
OIDR01011737
176075
Actinomycetota
TCT
Arg
>WENV182381933
OIDR01001421
175837
Actinomycetota
ACG
Arg
>WENV182382007
OIDR01005482
29393
Actinomycetota
GCT
Ser
>WENV182382012
OIDR01005856
280549
Actinomycetota
CAC
Val
>WENV182381783
OIDR01000042
280441
Actinomycetota
CCG
Arg
>WENV182381819
OIDR01000236
398843
Actinomycetota
GTT
Asn
>WENV182381818
OIDR01000236
398843
Actinomycetota
GTT
Asn
>WENV182382011
OIDR01005856
434162
Actinomycetota
GAC
Val
>WENV182381839
OIDR01000336
241064
Actinomycetota
CTC
Glu
>WENV182381946
OIDR01001557
176638
Actinomycetota
GGG
Pro
>WENV182381955
OIDR01001700
280524
Actinomycetota
TGC
Ala
>WENV182381882
OIDR01000592
176723
Actinomycetota
TCT
Arg
>WENV182381924
OIDR01001205
291585
Actinomycetota
GCC
Gly
>WENV182381910
OIDR01000909
176555
Actinomycetota
CAT
Met
>WENV182381757
OIDR01000009
280536
Actinomycetota
CTT
Lys
>WENV182382045
OIDR01008809
280496
Actinomycetota
CGT
Thr
>WENV182381825
OIDR01000245
175872
Actinomycetota
GTC
Asp
>WENV182381831
OIDR01000291
20205
Actinomycetota
GCT
Ser
>WENV182381801
OIDR01000130
175926
Actinomycetota
CAT
Met
>WENV182381960
OIDR01001896
280450
Actinomycetota
TTT
Lys
>WENV182381817
OIDR01000232
280450
Actinomycetota
TTT
Lys
>WENV182381914
OIDR01001048
480329
Actinomycetota
CCC
Gly
>WENV182381792
OIDR01000064
480329
Actinomycetota
CCC
Gly
>WENV182381838
OIDR01000336
483206
Actinomycetota
CTG
Gln
>WENV182382049
OIDR01009640
175882
Actinomycetota
TGG
Pro
>WENV182381894
OIDR01000700
480319
Actinomycetota
TTG
Gln
>WENV182381885
OIDR01000611
280489
Actinomycetota
CTC
Glu
>WENV182381799
OIDR01000114
280499
Actinomycetota
CCT
Arg
>WENV182381886
OIDR01000611
398853
Actinomycetota
CTG
Gln
>WENV182381899
OIDR01000725
175843
Actinomycetota
CAA
Leu
>WENV182382036
OIDR01007911
56075
Actinomycetota
TGA
Ser
>WENV182381807
OIDR01000175
46642
Actinomycetota
CGA
Ser
>WENV182381875
OIDR01000532
104211
Actinomycetota
CAG
Leu
>WENV182381809
OIDR01000194
104211
Actinomycetota
CAG
Leu
>WENV182382018
OIDR01006619
117903
Actinomycetota
GTA
Tyr
>WENV182381891
OIDR01000655
56071
Actinomycetota
TGA
Ser
>WENV182381870
OIDR01000506
147796
Actinomycetota
TAA
Leu
>WENV182381929
OIDR01001394
280470
Actinomycetota
CGT
Thr
>WENV182381915
OIDR01001051
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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