This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182385030
OIDV01001294
179231
Actinomycetota
TAC
Val
>WENV182385221
OIDV01013692
176499
Actinomycetota
CAT
Met
>WENV182384802
OIDV01000114
175907
Actinomycetota
TAC
Val
>WENV182385034
OIDV01001406
280498
Actinomycetota
GTT
Asn
>WENV182385056
OIDV01001846
295964
Actinomycetota
GTT
Asn
>WENV182384870
OIDV01000288
56083
Actinomycetota
CGA
Ser
>WENV182385068
OIDV01002273
140768
Actinomycetota
TAG
Leu
>WENV182384857
OIDV01000249
140768
Actinomycetota
TAG
Leu
>WENV182384980
OIDV01000926
176075
Actinomycetota
TCT
Arg
>WENV182385071
OIDV01002285
175848
Actinomycetota
TGG
Pro
>WENV182384892
OIDV01000400
176078
Actinomycetota
GGG
Pro
>WENV182384978
OIDV01000913
20208
Actinomycetota
GAG
Leu
>WENV182384795
OIDV01000100
59689
Actinomycetota
GGA
Ser
>WENV182385045
OIDV01001479
175837
Actinomycetota
ACG
Arg
>WENV182384911
OIDV01000515
175837
Actinomycetota
ACG
Arg
>WENV182384712
OIDV01000020
186055
Actinomycetota
ACG
Arg
>WENV182384713
OIDV01000020
186055
Actinomycetota
ACG
Arg
>WENV182385158
OIDV01007191
280549
Actinomycetota
CAC
Val
>WENV182385090
OIDV01002664
280702
Actinomycetota
GGC
Ala
>WENV182385089
OIDV01002664
280702
Actinomycetota
GGC
Ala
>WENV182385049
OIDV01001579
176077
Actinomycetota
CAT
Met
>WENV182385003
OIDV01001120
280524
Actinomycetota
TGC
Ala
>WENV182384800
OIDV01000107
280524
Actinomycetota
TGC
Ala
>WENV182384759
OIDV01000054
291585
Actinomycetota
GCC
Gly
>WENV182384755
OIDV01000054
291585
Actinomycetota
GCC
Gly
>WENV182384945
OIDV01000705
150272
Actinomycetota
TAA
Leu
>WENV182385152
OIDV01006705
117777
Actinomycetota
>WENV182385004
OIDV01001120
280523
Actinomycetota
GGC
Ala
>WENV182384898
OIDV01000433
191955
Actinomycetota
TGT
Thr
>WENV182384936
OIDV01000606
175841
Actinomycetota
TAT
Ile
>WENV182384858
OIDV01000249
280496
Actinomycetota
CGT
Thr
>WENV182384834
OIDV01000147
175872
Actinomycetota
GTC
Asp
>WENV182384929
OIDV01000562
280703
Actinomycetota
CCT
Arg
>WENV182384871
OIDV01000297
20205
Actinomycetota
GCT
Ser
>WENV182384694
OIDV01000012
175926
Actinomycetota
CAT
Met
>WENV182384879
OIDV01000334
280450
Actinomycetota
TTT
Lys
>WENV182384872
OIDV01000304
280450
Actinomycetota
TTT
Lys
>WENV182384856
OIDV01000249
323758
Actinomycetota
CGT
Thr
>WENV182384897
OIDV01000411
480329
Actinomycetota
CCC
Gly
>WENV182384667
OIDV01000006
483206
Actinomycetota
CTG
Gln
>WENV182384890
OIDV01000386
175882
Actinomycetota
TGG
Pro
>WENV182384944
OIDV01000696
20209
Actinomycetota
GAG
Leu
>WENV182384875
OIDV01000323
222475
Actinomycetota
CTT
Lys
>WENV182384970
OIDV01000835
480319
Actinomycetota
TTG
Gln
>WENV182384851
OIDV01000219
280499
Actinomycetota
CCT
Arg
>WENV182384845
OIDV01000200
398853
Actinomycetota
CTG
Gln
>WENV182385096
OIDV01002791
175843
Actinomycetota
CAA
Leu
>WENV182385041
OIDV01001459
175843
Actinomycetota
CAA
Leu
>WENV182384841
OIDV01000198
203883
Actinomycetota
TCT
Arg
>WENV182384868
OIDV01000273
56075
Actinomycetota
TGA
Ser
>WENV182385046
OIDV01001499
46642
Actinomycetota
CGA
Ser
>WENV182384912
OIDV01000516
317680
Actinomycetota
CCG
Arg
>WENV182384844
OIDV01000200
289788
Actinomycetota
CTC
Glu
>WENV182385220
OIDV01013692
117903
Actinomycetota
GTA
Tyr
>WENV182384969
OIDV01000818
56071
Actinomycetota
TGA
Ser
>WENV182384799
OIDV01000107
179238
Actinomycetota
GAT
Ile
>WENV182384899
OIDV01000440
147796
Actinomycetota
TAA
Leu
>WENV182385067
OIDV01002273
280470
Actinomycetota
CGT
Thr
>WENV182384946
OIDV01000710
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK