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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182399685
OIEO01000046
408526
Bacillota
GCA
Cys
>WENV182399598
OIEO01000011
296855
Bacillota
GGT
Thr
>WENV182399594
OIEO01000011
48505
Bacillota
TGA
Ser
>WENV182399635
OIEO01000023
48505
Bacillota
TGA
Ser
>WENV182399650
OIEO01000032
289717
Bacillota
CTT
Lys
>WENV182399648
OIEO01000031
20932
Bacillota
GCT
Ser
>WENV182399683
OIEO01000046
291553
Bacillota
GAA
Phe
>WENV182399694
OIEO01000052
291553
Bacillota
GAA
Phe
>WENV182399713
OIEO01000075
482593
Bacillota
CCC
Gly
>WENV182399783
OIEO01001703
339995
Bacillota
TGC
Ala
>WENV182399696
OIEO01000052
20942
Bacillota
GGA
Ser
>WENV182399599
OIEO01000011
184495
Bacillota
CAT
Met
>WENV182399698
OIEO01000054
141202
Bacillota
CAA
Leu
>WENV182399595
OIEO01000011
332181
Bacillota
TGT
Thr
>WENV182399658
OIEO01000036
404091
Bacillota
TTG
Gln
>WENV182399657
OIEO01000036
289716
Bacillota
GTG
His
>WENV182399602
OIEO01000011
432453
Bacillota
TTC
Glu
>WENV182399605
OIEO01000011
432453
Bacillota
TTC
Glu
>WENV182399701
OIEO01000055
480337
Bacillota
TCC
Gly
>WENV182399729
OIEO01000212
119459
Bacillota
TAG
Leu
>WENV182399693
OIEO01000052
280547
Bacillota
GTC
Asp
>WENV182399682
OIEO01000046
280547
Bacillota
GTC
Asp
>WENV182399684
OIEO01000046
445407
Bacillota
GCC
Gly
>WENV182399600
OIEO01000011
445407
Bacillota
GCC
Gly
>WENV182399659
OIEO01000036
289761
Bacillota
TTT
Lys
>WENV182399606
OIEO01000011
289715
Bacillota
TAC
Val
>WENV182399603
OIEO01000011
289715
Bacillota
TAC
Val
>WENV182399746
OIEO01000311
20943
Bacillota
CGA
Ser
>WENV182399699
OIEO01000055
20943
Bacillota
CGA
Ser
>WENV182399700
OIEO01000055
208539
Bacillota
TGG
Pro
>WENV182399702
OIEO01000055
184539
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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