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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182403230
OIET01001635
285360
Bacteroidota
TTT
Lys
>WENV182403194
OIET01001258
117741
Bacteroidota
TAG
Leu
>WENV182402792
OIET01000093
398829
Bacteroidota
CCT
Arg
>WENV182403245
OIET01001799
398829
Bacteroidota
CCT
Arg
>WENV182403276
OIET01002235
175838
Bacteroidota
GTT
Asn
>WENV182402761
OIET01000071
404226
Bacteroidota
CCT
Arg
>WENV182403148
OIET01000957
175904
Bacteroidota
CGG
Pro
>WENV182402970
OIET01000376
175904
Bacteroidota
CGG
Pro
>WENV182403106
OIET01000793
289031
Bacteroidota
CAT
Met
>WENV182402693
OIET01000042
280553
Bacteroidota
TTT
Lys
>WENV182403497
OIET01009374
280557
Bacteroidota
CAT
Met
>WENV182403012
OIET01000451
280557
Bacteroidota
CAT
Met
>WENV182402912
OIET01000219
280557
Bacteroidota
CAT
Met
>WENV182402963
OIET01000348
20492
Bacteroidota
GGA
Ser
>WENV182403327
OIET01002677
20206
Bacteroidota
GGA
Ser
>WENV182403438
OIET01005560
282712
Bacteroidota
TTT
Lys
>WENV182402760
OIET01000071
398871
Bacteroidota
TTC
Glu
>WENV182402759
OIET01000071
398871
Bacteroidota
TTC
Glu
>WENV182403016
OIET01000474
201819
Bacteroidota
CAT
Met
>WENV182402969
OIET01000372
56493
Bacteroidota
TGA
Ser
>WENV182402931
OIET01000247
175906
Bacteroidota
GTG
His
>WENV182403360
OIET01003321
175903
Bacteroidota
GTG
His
>WENV182403457
OIET01006499
351598
Bacteroidota
CGG
Pro
>WENV182403413
OIET01004625
351598
Bacteroidota
CGG
Pro
>WENV182403111
OIET01000800
351598
Bacteroidota
CGG
Pro
>WENV182403097
OIET01000724
351598
Bacteroidota
CGG
Pro
>WENV182402736
OIET01000062
351598
Bacteroidota
CGG
Pro
>WENV182403155
OIET01001006
118089
Bacteroidota
TAG
Leu
>WENV182402802
OIET01000097
118089
Bacteroidota
TAG
Leu
>WENV182402856
OIET01000137
175908
Bacteroidota
GTC
Asp
>WENV182403452
OIET01006199
280530
Bacteroidota
CCA
Trp
>WENV182402971
OIET01000376
280530
Bacteroidota
CCA
Trp
>WENV182403034
OIET01000542
203954
Bacteroidota
GTC
Asp
>WENV182402855
OIET01000137
203954
Bacteroidota
GTC
Asp
>WENV182402843
OIET01000121
29791
Bacteroidota
GCT
Ser
>WENV182403112
OIET01000801
182267
Bacteroidota
GTT
Asn
>WENV182403076
OIET01000675
20449
Bacteroidota
GGA
Ser
>WENV182402806
OIET01000098
20449
Bacteroidota
GGA
Ser
>WENV182403379
OIET01003716
56072
Bacteroidota
TAA
Leu
>WENV182403036
OIET01000547
57807
Bacteroidota
TGA
Ser
>WENV182403026
OIET01000510
57807
Bacteroidota
TGA
Ser
>WENV182402813
OIET01000106
57807
Bacteroidota
TGA
Ser
>WENV182403512
OIET01012087
175902
Bacteroidota
GGC
Ala
>WENV182403321
OIET01002563
175902
Bacteroidota
GGC
Ala
>WENV182403281
OIET01002261
175902
Bacteroidota
GGC
Ala
>WENV182403489
OIET01008862
398860
Bacteroidota
CTC
Glu
>WENV182403013
OIET01000460
398860
Bacteroidota
CTC
Glu
>WENV182402844
OIET01000121
398860
Bacteroidota
CTC
Glu
>WENV182403422
OIET01005124
280451
Bacteroidota
CGT
Thr
>WENV182403149
OIET01000964
99847
Bacteroidota
GTA
Tyr
>WENV182403033
OIET01000539
99847
Bacteroidota
GTA
Tyr
>WENV182403147
OIET01000955
399200
Bacteroidota
CAT
Met
>WENV182403094
OIET01000719
399200
Bacteroidota
CAT
Met
>WENV182403059
OIET01000621
399200
Bacteroidota
CAT
Met
>WENV182402785
OIET01000082
399200
Bacteroidota
CAT
Met
>WENV182403069
OIET01000654
332896
Bacteroidota
TTT
Lys
>WENV182402936
OIET01000256
332896
Bacteroidota
TTT
Lys
>WENV182402821
OIET01000108
332896
Bacteroidota
TTT
Lys
>WENV182403246
OIET01001805
488746
Bacteroidota
CTG
Gln
>WENV182403081
OIET01000687
488746
Bacteroidota
CTG
Gln
>WENV182402951
OIET01000320
280478
Bacteroidota
GCC
Gly
>WENV182402923
OIET01000235
280478
Bacteroidota
GCC
Gly
>WENV182402921
OIET01000235
280478
Bacteroidota
GCC
Gly
>WENV182402908
OIET01000213
280478
Bacteroidota
GCC
Gly
>WENV182402896
OIET01000203
280478
Bacteroidota
GCC
Gly
>WENV182402894
OIET01000203
280478
Bacteroidota
GCC
Gly
>WENV182403082
OIET01000687
20766
Bacteroidota
GGA
Ser
>WENV182403487
OIET01008719
175844
Bacteroidota
GGC
Ala
>WENV182403045
OIET01000568
175844
Bacteroidota
GGC
Ala
>WENV182402872
OIET01000154
73011
Bacteroidota
CAA
Leu
>WENV182403444
OIET01006020
183889
Bacteroidota
GGC
Ala
>WENV182403248
OIET01001869
158068
Bacteroidota
GGG
Pro
>WENV182403231
OIET01001649
158068
Bacteroidota
GGG
Pro
>WENV182402829
OIET01000112
158068
Bacteroidota
GGG
Pro
>WENV182403484
OIET01008401
398828
Bacteroidota
CCG
Arg
>WENV182402889
OIET01000188
398828
Bacteroidota
CCG
Arg
>WENV182402803
OIET01000098
74084
Bacteroidota
CAG
Leu
>WENV182403419
OIET01004904
159415
Bacteroidota
TAC
Val
>WENV182402713
OIET01000051
480325
Bacteroidota
CTG
Gln
>WENV182402712
OIET01000051
480325
Bacteroidota
CTG
Gln
>WENV182403289
OIET01002356
140771
Bacteroidota
>WENV182402861
OIET01000143
176192
Bacteroidota
TCT
Arg
>WENV182402763
OIET01000072
176192
Bacteroidota
TCT
Arg
>WENV182403328
OIET01002709
280446
Bacteroidota
TTT
Lys
>WENV182403029
OIET01000520
280446
Bacteroidota
TTT
Lys
>WENV182402942
OIET01000275
280446
Bacteroidota
TTT
Lys
>WENV182402686
OIET01000036
280446
Bacteroidota
TTT
Lys
>WENV182403405
OIET01004487
484496
Bacteroidota
TTG
Gln
>WENV182403282
OIET01002265
484496
Bacteroidota
TTG
Gln
>WENV182402636
OIET01000017
484496
Bacteroidota
TTG
Gln
>WENV182403252
OIET01001915
285750
Bacteroidota
CCC
Gly
>WENV182402899
OIET01000206
285750
Bacteroidota
CCC
Gly
>WENV182403499
OIET01009826
398836
Bacteroidota
GCA
Cys
>WENV182403425
OIET01005187
398836
Bacteroidota
GCA
Cys
>WENV182403392
OIET01004040
398836
Bacteroidota
GCA
Cys
>WENV182403371
OIET01003541
398836
Bacteroidota
GCA
Cys
>WENV182403287
OIET01002351
398836
Bacteroidota
GCA
Cys
>WENV182403191
OIET01001250
398836
Bacteroidota
GCA
Cys
>WENV182403137
OIET01000922
398836
Bacteroidota
GCA
Cys
>WENV182402998
OIET01000414
398836
Bacteroidota
GCA
Cys
>WENV182402952
OIET01000328
398836
Bacteroidota
GCA
Cys
>WENV182402898
OIET01000204
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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