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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
141 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182404064
OIEU01001972
481233
Actinomycetota
CCC
Gly
>WENV182403809
OIEU01000353
179231
Actinomycetota
TAC
Val
>WENV182403575
OIEU01000009
176499
Actinomycetota
CAT
Met
>WENV182403870
OIEU01000548
176499
Actinomycetota
CAT
Met
>WENV182403726
OIEU01000172
175907
Actinomycetota
TAC
Val
>WENV182403697
OIEU01000145
147829
Actinomycetota
TAA
Leu
>WENV182403626
OIEU01000047
283311
Actinomycetota
CCT
Arg
>WENV182403798
OIEU01000313
147806
Actinomycetota
TAA
Leu
>WENV182403866
OIEU01000542
280498
Actinomycetota
GTT
Asn
>WENV182403792
OIEU01000308
280498
Actinomycetota
GTT
Asn
>WENV182403739
OIEU01000210
280498
Actinomycetota
GTT
Asn
>WENV182403738
OIEU01000210
280498
Actinomycetota
GTT
Asn
>WENV182403710
OIEU01000157
316729
Actinomycetota
CAC
Val
>WENV182403563
OIEU01000007
316729
Actinomycetota
CAC
Val
>WENV182403857
OIEU01000496
295964
Actinomycetota
GTT
Asn
>WENV182403616
OIEU01000031
295964
Actinomycetota
GTT
Asn
>WENV182403551
OIEU01000004
295964
Actinomycetota
GTT
Asn
>WENV182403550
OIEU01000004
295964
Actinomycetota
GTT
Asn
>WENV182403594
OIEU01000018
56083
Actinomycetota
CGA
Ser
>WENV182403986
OIEU01001038
140768
Actinomycetota
TAG
Leu
>WENV182403938
OIEU01000760
140768
Actinomycetota
TAG
Leu
>WENV182403762
OIEU01000262
140768
Actinomycetota
TAG
Leu
>WENV182403578
OIEU01000009
56384
Actinomycetota
TGA
Ser
>WENV182403799
OIEU01000317
176075
Actinomycetota
TCT
Arg
>WENV182403718
OIEU01000165
176075
Actinomycetota
TCT
Arg
>WENV182403699
OIEU01000146
176075
Actinomycetota
TCT
Arg
>WENV182404082
OIEU01002424
175848
Actinomycetota
TGG
Pro
>WENV182403746
OIEU01000220
175848
Actinomycetota
TGG
Pro
>WENV182403825
OIEU01000376
176078
Actinomycetota
GGG
Pro
>WENV182403695
OIEU01000139
176078
Actinomycetota
GGG
Pro
>WENV182403549
OIEU01000004
176078
Actinomycetota
GGG
Pro
>WENV182404137
OIEU01002937
482604
Actinomycetota
TTG
Gln
>WENV182403796
OIEU01000312
482604
Actinomycetota
TTG
Gln
>WENV182403743
OIEU01000220
482604
Actinomycetota
TTG
Gln
>WENV182403908
OIEU01000678
152047
Actinomycetota
ACG
Arg
>WENV182403943
OIEU01000783
59689
Actinomycetota
GGA
Ser
>WENV182403808
OIEU01000345
59689
Actinomycetota
GGA
Ser
>WENV182403685
OIEU01000121
59689
Actinomycetota
GGA
Ser
>WENV182403894
OIEU01000580
175837
Actinomycetota
ACG
Arg
>WENV182403893
OIEU01000580
175837
Actinomycetota
ACG
Arg
>WENV182403892
OIEU01000576
175837
Actinomycetota
ACG
Arg
>WENV182403891
OIEU01000576
175837
Actinomycetota
ACG
Arg
>WENV182403752
OIEU01000238
175837
Actinomycetota
ACG
Arg
>WENV182403751
OIEU01000238
175837
Actinomycetota
ACG
Arg
>WENV182403603
OIEU01000021
175837
Actinomycetota
ACG
Arg
>WENV182403783
OIEU01000293
46681
Actinomycetota
CGA
Ser
>WENV182403984
OIEU01001020
29393
Actinomycetota
GCT
Ser
>WENV182403765
OIEU01000271
29393
Actinomycetota
GCT
Ser
>WENV182404417
OIEU01022935
280549
Actinomycetota
CAC
Val
>WENV182404085
OIEU01002449
280549
Actinomycetota
CAC
Val
>WENV182403788
OIEU01000296
280549
Actinomycetota
CAC
Val
>WENV182403547
OIEU01000004
280549
Actinomycetota
CAC
Val
>WENV182403577
OIEU01000009
56383
Actinomycetota
CGA
Ser
>WENV182403749
OIEU01000230
20450
Actinomycetota
GAG
Leu
>WENV182403745
OIEU01000220
280702
Actinomycetota
GGC
Ala
>WENV182403744
OIEU01000220
280702
Actinomycetota
GGC
Ala
>WENV182403826
OIEU01000378
280702
Actinomycetota
GGC
Ala
>WENV182403827
OIEU01000378
280702
Actinomycetota
GGC
Ala
>WENV182403728
OIEU01000179
140878
Actinomycetota
TAA
Leu
>WENV182404416
OIEU01022935
434162
Actinomycetota
GAC
Val
>WENV182404084
OIEU01002449
434162
Actinomycetota
GAC
Val
>WENV182403787
OIEU01000296
434162
Actinomycetota
GAC
Val
>WENV182403546
OIEU01000004
434162
Actinomycetota
GAC
Val
>WENV182403631
OIEU01000057
176077
Actinomycetota
CAT
Met
>WENV182403840
OIEU01000455
176077
Actinomycetota
CAT
Met
>WENV182403737
OIEU01000206
283312
Actinomycetota
GTG
His
>WENV182403807
OIEU01000341
21508
Actinomycetota
GAG
Leu
>WENV182403637
OIEU01000070
176638
Actinomycetota
GGG
Pro
>WENV182404126
OIEU01002792
280524
Actinomycetota
TGC
Ala
>WENV182404037
OIEU01001670
280524
Actinomycetota
TGC
Ala
>WENV182404031
OIEU01001590
280524
Actinomycetota
TGC
Ala
>WENV182403614
OIEU01000030
280524
Actinomycetota
TGC
Ala
>WENV182403560
OIEU01000007
283313
Actinomycetota
CCG
Arg
>WENV182403775
OIEU01000279
398948
Actinomycetota
TTC
Glu
>WENV182403664
OIEU01000104
398948
Actinomycetota
TTC
Glu
>WENV182403598
OIEU01000018
398948
Actinomycetota
TTC
Glu
>WENV182403993
OIEU01001093
176723
Actinomycetota
TCT
Arg
>WENV182403912
OIEU01000678
480374
Actinomycetota
TTG
Gln
>WENV182404039
OIEU01001673
150272
Actinomycetota
TAA
Leu
>WENV182403574
OIEU01000009
117777
Actinomycetota
>WENV182404038
OIEU01001670
280523
Actinomycetota
GGC
Ala
>WENV182403797
OIEU01000312
280523
Actinomycetota
GGC
Ala
>WENV182403740
OIEU01000210
280523
Actinomycetota
GGC
Ala
>WENV182403564
OIEU01000007
280523
Actinomycetota
GGC
Ala
>WENV182403983
OIEU01001020
175949
Actinomycetota
CAT
Met
>WENV182403764
OIEU01000271
175949
Actinomycetota
CAT
Met
>WENV182403703
OIEU01000149
227544
Actinomycetota
TAC
Val
>WENV182403543
OIEU01000002
227544
Actinomycetota
TAC
Val
>WENV182403742
OIEU01000215
176555
Actinomycetota
CAT
Met
>WENV182404029
OIEU01001587
191955
Actinomycetota
TGT
Thr
>WENV182403733
OIEU01000199
191955
Actinomycetota
TGT
Thr
>WENV182403623
OIEU01000040
20415
Actinomycetota
GAG
Leu
>WENV182404200
OIEU01005048
280544
Actinomycetota
GTG
His
>WENV182403926
OIEU01000721
280544
Actinomycetota
GTG
His
>WENV182403939
OIEU01000760
280496
Actinomycetota
CGT
Thr
>WENV182403736
OIEU01000203
280703
Actinomycetota
CCT
Arg
>WENV182403632
OIEU01000057
280703
Actinomycetota
CCT
Arg
>WENV182403658
OIEU01000091
140879
Actinomycetota
TAG
Leu
>WENV182403576
OIEU01000009
20205
Actinomycetota
GCT
Ser
>WENV182403643
OIEU01000071
178569
Actinomycetota
CAT
Met
>WENV182403987
OIEU01001041
280450
Actinomycetota
TTT
Lys
>WENV182403997
OIEU01001140
280450
Actinomycetota
TTT
Lys
>WENV182403902
OIEU01000648
323758
Actinomycetota
CGT
Thr
>WENV182403761
OIEU01000262
323758
Actinomycetota
CGT
Thr
>WENV182403886
OIEU01000574
480329
Actinomycetota
CCC
Gly
>WENV182403627
OIEU01000048
480329
Actinomycetota
CCC
Gly
>WENV182403789
OIEU01000297
56451
Actinomycetota
CGA
Ser
>WENV182403795
OIEU01000309
175882
Actinomycetota
TGG
Pro
>WENV182403628
OIEU01000048
99865
Actinomycetota
CAG
Leu
>WENV182403946
OIEU01000799
99865
Actinomycetota
CAG
Leu
>WENV182404172
OIEU01003851
99865
Actinomycetota
CAG
Leu
>WENV182404011
OIEU01001359
222475
Actinomycetota
CTT
Lys
>WENV182403895
OIEU01000586
222475
Actinomycetota
CTT
Lys
>WENV182403565
OIEU01000007
222475
Actinomycetota
CTT
Lys
>WENV182403638
OIEU01000070
480319
Actinomycetota
TTG
Gln
>WENV182403872
OIEU01000559
280489
Actinomycetota
CTC
Glu
>WENV182403949
OIEU01000847
280499
Actinomycetota
CCT
Arg
>WENV182403873
OIEU01000559
398853
Actinomycetota
CTG
Gln
>WENV182403683
OIEU01000121
398853
Actinomycetota
CTG
Gln
>WENV182403559
OIEU01000007
398853
Actinomycetota
CTG
Gln
>WENV182403794
OIEU01000309
176642
Actinomycetota
CAA
Leu
>WENV182403933
OIEU01000749
175843
Actinomycetota
CAA
Leu
>WENV182403698
OIEU01000145
175843
Actinomycetota
CAA
Leu
>WENV182403669
OIEU01000107
175843
Actinomycetota
CAA
Leu
>WENV182403595
OIEU01000018
56075
Actinomycetota
TGA
Ser
>WENV182403885
OIEU01000574
104211
Actinomycetota
CAG
Leu
>WENV182403896
OIEU01000600
317680
Actinomycetota
CCG
Arg
>WENV182403871
OIEU01000551
317680
Actinomycetota
CCG
Arg
>WENV182403785
OIEU01000296
317680
Actinomycetota
CCG
Arg
>WENV182403942
OIEU01000783
430848
Actinomycetota
CTG
Gln
>WENV182403604
OIEU01000021
178568
Actinomycetota
ACG
Arg
>WENV182403941
OIEU01000783
289788
Actinomycetota
CTC
Glu
>WENV182403682
OIEU01000121
289788
Actinomycetota
CTC
Glu
>WENV182403558
OIEU01000007
289788
Actinomycetota
CTC
Glu
>WENV182403869
OIEU01000548
117903
Actinomycetota
GTA
Tyr
>WENV182404125
OIEU01002792
179238
Actinomycetota
GAT
Ile
>WENV182404030
OIEU01001590
179238
Actinomycetota
GAT
Ile
>WENV182403760
OIEU01000261
60767
Actinomycetota
TGA
Ser
>WENV182403657
OIEU01000091
280470
Actinomycetota
CGT
Thr
>WENV182403985
OIEU01001038
280470
Actinomycetota
CGT
Thr
>WENV182404180
OIEU01004201
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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