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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182405506
OIEV01007413
295385
Bacteroidota
CCA
Trp
>WENV182405026
OIEV01000536
117741
Bacteroidota
TAG
Leu
>WENV182405607
OIEV01017083
117741
Bacteroidota
TAG
Leu
>WENV182404576
OIEV01000021
398829
Bacteroidota
CCT
Arg
>WENV182405123
OIEV01000848
398829
Bacteroidota
CCT
Arg
>WENV182405197
OIEV01001305
175838
Bacteroidota
GTT
Asn
>WENV182405198
OIEV01001305
175838
Bacteroidota
GTT
Asn
>WENV182404874
OIEV01000265
404226
Bacteroidota
CCT
Arg
>WENV182405192
OIEV01001273
175904
Bacteroidota
CGG
Pro
>WENV182405166
OIEV01001071
175904
Bacteroidota
CGG
Pro
>WENV182405317
OIEV01002847
289031
Bacteroidota
CAT
Met
>WENV182405177
OIEV01001178
280553
Bacteroidota
TTT
Lys
>WENV182404929
OIEV01000342
280553
Bacteroidota
TTT
Lys
>WENV182405512
OIEV01007674
280557
Bacteroidota
CAT
Met
>WENV182405511
OIEV01007674
280557
Bacteroidota
CAT
Met
>WENV182405510
OIEV01007627
280557
Bacteroidota
CAT
Met
>WENV182405080
OIEV01000684
280557
Bacteroidota
CAT
Met
>WENV182404845
OIEV01000218
280557
Bacteroidota
CAT
Met
>WENV182404750
OIEV01000101
20492
Bacteroidota
GGA
Ser
>WENV182405315
OIEV01002819
20206
Bacteroidota
GGA
Ser
>WENV182405314
OIEV01002817
20206
Bacteroidota
GGA
Ser
>WENV182405505
OIEV01007297
282712
Bacteroidota
TTT
Lys
>WENV182404876
OIEV01000265
398871
Bacteroidota
TTC
Glu
>WENV182404875
OIEV01000265
398871
Bacteroidota
TTC
Glu
>WENV182404940
OIEV01000346
201819
Bacteroidota
CAT
Met
>WENV182405624
OIEV01020490
56493
Bacteroidota
TGA
Ser
>WENV182405072
OIEV01000663
56493
Bacteroidota
TGA
Ser
>WENV182405064
OIEV01000627
56493
Bacteroidota
TGA
Ser
>WENV182404992
OIEV01000460
175906
Bacteroidota
GTG
His
>WENV182404991
OIEV01000460
175906
Bacteroidota
GTG
His
>WENV182404880
OIEV01000275
175903
Bacteroidota
GTG
His
>WENV182405632
OIEV01022072
291612
Bacteroidota
>WENV182405129
OIEV01000872
118089
Bacteroidota
TAG
Leu
>WENV182404740
OIEV01000096
118089
Bacteroidota
TAG
Leu
>WENV182404889
OIEV01000297
398872
Bacteroidota
GGT
Thr
>WENV182404857
OIEV01000241
175908
Bacteroidota
GTC
Asp
>WENV182405193
OIEV01001273
280530
Bacteroidota
CCA
Trp
>WENV182404792
OIEV01000139
280530
Bacteroidota
CCA
Trp
>WENV182405109
OIEV01000779
203954
Bacteroidota
GTC
Asp
>WENV182405082
OIEV01000689
203954
Bacteroidota
GTC
Asp
>WENV182404856
OIEV01000241
203954
Bacteroidota
GTC
Asp
>WENV182404854
OIEV01000236
29791
Bacteroidota
GCT
Ser
>WENV182405435
OIEV01004651
182267
Bacteroidota
GTT
Asn
>WENV182404980
OIEV01000440
20449
Bacteroidota
GGA
Ser
>WENV182404877
OIEV01000267
20449
Bacteroidota
GGA
Ser
>WENV182404696
OIEV01000082
20449
Bacteroidota
GGA
Ser
>WENV182405013
OIEV01000486
56072
Bacteroidota
TAA
Leu
>WENV182405431
OIEV01004576
56072
Bacteroidota
TAA
Leu
>WENV182405186
OIEV01001242
57807
Bacteroidota
TGA
Ser
>WENV182405014
OIEV01000487
57807
Bacteroidota
TGA
Ser
>WENV182404806
OIEV01000158
57807
Bacteroidota
TGA
Ser
>WENV182404706
OIEV01000085
57807
Bacteroidota
TGA
Ser
>WENV182404850
OIEV01000229
175902
Bacteroidota
GGC
Ala
>WENV182404855
OIEV01000236
398860
Bacteroidota
CTC
Glu
>WENV182404954
OIEV01000361
280451
Bacteroidota
CGT
Thr
>WENV182405313
OIEV01002801
99847
Bacteroidota
GTA
Tyr
>WENV182405232
OIEV01001526
99847
Bacteroidota
GTA
Tyr
>WENV182405099
OIEV01000759
99847
Bacteroidota
GTA
Tyr
>WENV182404659
OIEV01000054
99847
Bacteroidota
GTA
Tyr
>WENV182405169
OIEV01001102
399200
Bacteroidota
CAT
Met
>WENV182405106
OIEV01000772
399200
Bacteroidota
CAT
Met
>WENV182405010
OIEV01000484
399200
Bacteroidota
CAT
Met
>WENV182405009
OIEV01000484
399200
Bacteroidota
CAT
Met
>WENV182405529
OIEV01008144
332896
Bacteroidota
TTT
Lys
>WENV182405291
OIEV01002318
332896
Bacteroidota
TTT
Lys
>WENV182405196
OIEV01001304
332896
Bacteroidota
TTT
Lys
>WENV182405071
OIEV01000660
332896
Bacteroidota
TTT
Lys
>WENV182405021
OIEV01000511
332896
Bacteroidota
TTT
Lys
>WENV182404799
OIEV01000149
332896
Bacteroidota
TTT
Lys
>WENV182405391
OIEV01003937
488746
Bacteroidota
CTG
Gln
>WENV182405221
OIEV01001432
488746
Bacteroidota
CTG
Gln
>WENV182405415
OIEV01004180
280478
Bacteroidota
GCC
Gly
>WENV182405057
OIEV01000608
280478
Bacteroidota
GCC
Gly
>WENV182405055
OIEV01000608
280478
Bacteroidota
GCC
Gly
>WENV182405027
OIEV01000537
280478
Bacteroidota
GCC
Gly
>WENV182404702
OIEV01000082
280478
Bacteroidota
GCC
Gly
>WENV182404700
OIEV01000082
280478
Bacteroidota
GCC
Gly
>WENV182405615
OIEV01017901
20766
Bacteroidota
GGA
Ser
>WENV182404843
OIEV01000210
175844
Bacteroidota
GGC
Ala
>WENV182405022
OIEV01000513
73011
Bacteroidota
CAA
Leu
>WENV182405249
OIEV01001740
158068
Bacteroidota
GGG
Pro
>WENV182405227
OIEV01001508
158068
Bacteroidota
GGG
Pro
>WENV182404975
OIEV01000426
158068
Bacteroidota
GGG
Pro
>WENV182404618
OIEV01000034
158068
Bacteroidota
GGG
Pro
>WENV182405131
OIEV01000886
186142
Bacteroidota
GAT
Ile
>WENV182405235
OIEV01001582
398828
Bacteroidota
CCG
Arg
>WENV182405376
OIEV01003646
74084
Bacteroidota
CAG
Leu
>WENV182405028
OIEV01000537
74084
Bacteroidota
CAG
Leu
>WENV182404969
OIEV01000405
480325
Bacteroidota
CTG
Gln
>WENV182404968
OIEV01000405
480325
Bacteroidota
CTG
Gln
>WENV182405446
OIEV01004833
140771
Bacteroidota
>WENV182405443
OIEV01004833
140771
Bacteroidota
>WENV182404977
OIEV01000431
140771
Bacteroidota
>WENV182404853
OIEV01000235
176192
Bacteroidota
TCT
Arg
>WENV182405212
OIEV01001356
400088
Bacteroidota
GGT
Thr
>WENV182404791
OIEV01000139
400088
Bacteroidota
GGT
Thr
>WENV182405491
OIEV01006221
280446
Bacteroidota
TTT
Lys
>WENV182405307
OIEV01002715
280446
Bacteroidota
TTT
Lys
>WENV182404993
OIEV01000467
280446
Bacteroidota
TTT
Lys
>WENV182404809
OIEV01000164
280446
Bacteroidota
TTT
Lys
>WENV182404804
OIEV01000156
280446
Bacteroidota
TTT
Lys
>WENV182404555
OIEV01000012
280446
Bacteroidota
TTT
Lys
>WENV182405261
OIEV01001987
484496
Bacteroidota
TTG
Gln
>WENV182404836
OIEV01000185
484496
Bacteroidota
TTG
Gln
>WENV182404577
OIEV01000022
484496
Bacteroidota
TTG
Gln
>WENV182405090
OIEV01000727
285750
Bacteroidota
CCC
Gly
>WENV182405250
OIEV01001743
285750
Bacteroidota
CCC
Gly
>WENV182405585
OIEV01013726
398836
Bacteroidota
GCA
Cys
>WENV182405582
OIEV01013226
398836
Bacteroidota
GCA
Cys
>WENV182405565
OIEV01011483
398836
Bacteroidota
GCA
Cys
>WENV182405295
OIEV01002417
398836
Bacteroidota
GCA
Cys
>WENV182405294
OIEV01002392
398836
Bacteroidota
GCA
Cys
>WENV182404908
OIEV01000318
398836
Bacteroidota
GCA
Cys
>WENV182404829
OIEV01000177
398836
Bacteroidota
GCA
Cys
>WENV182404824
OIEV01000175
398836
Bacteroidota
GCA
Cys
>WENV182404807
OIEV01000162
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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