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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182422226
OIGV01000695
349107
Bacillota
GCC
Gly
>WENV182422249
OIGV01000922
349107
Bacillota
GCC
Gly
>WENV182422512
OIGV01027473
405363
Bacillota
GCA
Cys
>WENV182422225
OIGV01000695
280428
Bacillota
GAA
Phe
>WENV182422250
OIGV01000922
280466
Bacillota
TAC
Val
>WENV182422346
OIGV01002829
175842
Bacillota
CAC
Val
>WENV182422474
OIGV01016847
184497
Bacillota
GGG
Pro
>WENV182422151
OIGV01000155
190476
Bacillota
CAT
Met
>WENV182422399
OIGV01006015
186123
Bacillota
GTC
Asp
>WENV182422208
OIGV01000535
73009
Bacillota
CAG
Leu
>WENV182422389
OIGV01005329
175859
Bacillota
TCT
Arg
>WENV182422360
OIGV01003066
175831
Bacillota
ACG
Arg
>WENV182422400
OIGV01006015
291634
Bacillota
GAA
Phe
>WENV182422419
OIGV01007672
346451
Bacillota
TTT
Lys
>WENV182422383
OIGV01004533
114298
Bacillota
CAG
Leu
>WENV182422358
OIGV01002870
480322
Bacillota
CTG
Gln
>WENV182422431
OIGV01009661
175868
Bacillota
GTT
Asn
>WENV182422430
OIGV01009661
398854
Bacillota
CTC
Glu
>WENV182422323
OIGV01002116
291576
Bacillota
CCC
Gly
>WENV182422366
OIGV01003493
480324
Bacillota
TTG
Gln
>WENV182422515
OIGV01028291
497729
Bacillota
CCA
Trp
>WENV182422331
OIGV01002537
303718
Bacillota
TGT
Thr
>WENV182422488
OIGV01020206
186051
Bacillota
GAT
Ile
>WENV182422450
OIGV01011699
280444
Bacillota
GGT
Thr
>WENV182422237
OIGV01000778
179755
Bacillota
CCG
Arg
>WENV182422387
OIGV01005142
46835
Bacillota
TAA
Leu
>WENV182422232
OIGV01000750
398832
Bacillota
TTC
Glu
>WENV182422152
OIGV01000155
398832
Bacillota
TTC
Glu
>WENV182422385
OIGV01005142
175915
Bacillota
GTC
Asp
>WENV182422478
OIGV01017979
201856
Bacillota
GAT
Ile
>WENV182422462
OIGV01014024
289123
Bacillota
GGT
Thr
>WENV182422395
OIGV01005842
398833
Bacillota
TGT
Thr
>WENV182422449
OIGV01011699
175849
Bacillota
GTC
Asp
>WENV182422372
OIGV01004047
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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