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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182423421
OIHB01002449
176499
Actinomycetota
CAT
Met
>WENV182423477
OIHB01005029
349003
Actinomycetota
CCG
Arg
>WENV182423389
OIHB01001066
147806
Actinomycetota
TAA
Leu
>WENV182423336
OIHB01000376
280498
Actinomycetota
GTT
Asn
>WENV182423534
OIHB01009401
56083
Actinomycetota
CGA
Ser
>WENV182423447
OIHB01003480
140768
Actinomycetota
TAG
Leu
>WENV182423399
OIHB01001389
176075
Actinomycetota
TCT
Arg
>WENV182423471
OIHB01004788
175848
Actinomycetota
TGG
Pro
>WENV182423462
OIHB01003985
176078
Actinomycetota
GGG
Pro
>WENV182423426
OIHB01002595
175837
Actinomycetota
ACG
Arg
>WENV182423410
OIHB01002027
29393
Actinomycetota
GCT
Ser
>WENV182423398
OIHB01001377
280549
Actinomycetota
CAC
Val
>WENV182423433
OIHB01003059
280702
Actinomycetota
GGC
Ala
>WENV182423487
OIHB01005974
176077
Actinomycetota
CAT
Met
>WENV182423481
OIHB01005248
21508
Actinomycetota
GAG
Leu
>WENV182423552
OIHB01011955
280524
Actinomycetota
TGC
Ala
>WENV182423343
OIHB01000478
398948
Actinomycetota
TTC
Glu
>WENV182423553
OIHB01012055
150272
Actinomycetota
TAA
Leu
>WENV182423334
OIHB01000371
117777
Actinomycetota
>WENV182423405
OIHB01001670
280523
Actinomycetota
GGC
Ala
>WENV182423451
OIHB01003555
175949
Actinomycetota
CAT
Met
>WENV182423612
OIHB01023118
176555
Actinomycetota
CAT
Met
>WENV182423489
OIHB01006062
280496
Actinomycetota
CGT
Thr
>WENV182423382
OIHB01000901
280703
Actinomycetota
CCT
Arg
>WENV182423342
OIHB01000472
280450
Actinomycetota
TTT
Lys
>WENV182423446
OIHB01003480
323758
Actinomycetota
CGT
Thr
>WENV182423472
OIHB01004809
56166
Actinomycetota
TGA
Ser
>WENV182423455
OIHB01003599
480329
Actinomycetota
CCC
Gly
>WENV182423490
OIHB01006176
175882
Actinomycetota
TGG
Pro
>WENV182423392
OIHB01001104
222475
Actinomycetota
CTT
Lys
>WENV182423582
OIHB01016060
480319
Actinomycetota
TTG
Gln
>WENV182423395
OIHB01001209
280499
Actinomycetota
CCT
Arg
>WENV182423352
OIHB01000534
398853
Actinomycetota
CTG
Gln
>WENV182423474
OIHB01004892
176642
Actinomycetota
CAA
Leu
>WENV182423528
OIHB01008218
175843
Actinomycetota
CAA
Leu
>WENV182423404
OIHB01001492
237585
Actinomycetota
TAC
Val
>WENV182423624
OIHB01026634
203883
Actinomycetota
TCT
Arg
>WENV182423425
OIHB01002526
46642
Actinomycetota
CGA
Ser
>WENV182423452
OIHB01003570
104211
Actinomycetota
CAG
Leu
>WENV182423420
OIHB01002449
117903
Actinomycetota
GTA
Tyr
>WENV182423551
OIHB01011955
179238
Actinomycetota
GAT
Ile
>WENV182423361
OIHB01000656
280470
Actinomycetota
CGT
Thr
>WENV182423464
OIHB01004124
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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