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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182426250
OIHP01000088
117741
Bacteroidota
TAG
Leu
>WENV182426232
OIHP01000036
280557
Bacteroidota
CAT
Met
>WENV182426244
OIHP01000057
280557
Bacteroidota
CAT
Met
>WENV182426260
OIHP01000119
20206
Bacteroidota
GGA
Ser
>WENV182426228
OIHP01000029
201819
Bacteroidota
CAT
Met
>WENV182426269
OIHP01000160
56493
Bacteroidota
TGA
Ser
>WENV182426246
OIHP01000068
175903
Bacteroidota
GTG
His
>WENV182426255
OIHP01000111
175936
Bacteroidota
CAT
Met
>WENV182426237
OIHP01000048
57807
Bacteroidota
TGA
Ser
>WENV182426231
OIHP01000035
57807
Bacteroidota
TGA
Ser
>WENV182426216
OIHP01000015
57807
Bacteroidota
TGA
Ser
>WENV182426294
OIHP01000565
175902
Bacteroidota
GGC
Ala
>WENV182426342
OIHP01002791
398860
Bacteroidota
CTC
Glu
>WENV182426254
OIHP01000102
480404
Bacteroidota
TTG
Gln
>WENV182426289
OIHP01000467
280451
Bacteroidota
CGT
Thr
>WENV182426271
OIHP01000164
99847
Bacteroidota
GTA
Tyr
>WENV182426245
OIHP01000064
488746
Bacteroidota
CTG
Gln
>WENV182426213
OIHP01000010
399026
Bacteroidota
CCT
Arg
>WENV182426205
OIHP01000001
20766
Bacteroidota
GGA
Ser
>WENV182426236
OIHP01000046
175844
Bacteroidota
GGC
Ala
>WENV182426247
OIHP01000073
280532
Bacteroidota
>WENV182426209
OIHP01000002
480318
Bacteroidota
CTG
Gln
>WENV182426207
OIHP01000002
158068
Bacteroidota
GGG
Pro
>WENV182426211
OIHP01000008
398828
Bacteroidota
CCG
Arg
>WENV182426218
OIHP01000016
176192
Bacteroidota
TCT
Arg
>WENV182426252
OIHP01000100
280446
Bacteroidota
TTT
Lys
>WENV182426239
OIHP01000051
280446
Bacteroidota
TTT
Lys
>WENV182426277
OIHP01000213
484496
Bacteroidota
TTG
Gln
>WENV182426212
OIHP01000009
117804
Bacteroidota
TAG
Leu
>WENV182426262
OIHP01000145
398836
Bacteroidota
GCA
Cys
>WENV182426217
OIHP01000015
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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