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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182426447
OIHQ01000027
285360
Bacteroidota
TTT
Lys
>WENV182426469
OIHQ01000090
285360
Bacteroidota
TTT
Lys
>WENV182426500
OIHQ01000269
117741
Bacteroidota
TAG
Leu
>WENV182426442
OIHQ01000017
398829
Bacteroidota
CCT
Arg
>WENV182426461
OIHQ01000072
175838
Bacteroidota
GTT
Asn
>WENV182426462
OIHQ01000072
175838
Bacteroidota
GTT
Asn
>WENV182426654
OIHQ01006662
289031
Bacteroidota
CAT
Met
>WENV182426472
OIHQ01000097
280557
Bacteroidota
CAT
Met
>WENV182426450
OIHQ01000041
280557
Bacteroidota
CAT
Met
>WENV182426414
OIHQ01000001
20206
Bacteroidota
GGA
Ser
>WENV182426647
OIHQ01005711
483416
Bacteroidota
CTG
Gln
>WENV182426463
OIHQ01000074
56493
Bacteroidota
TGA
Ser
>WENV182426435
OIHQ01000014
56493
Bacteroidota
TGA
Ser
>WENV182426436
OIHQ01000014
175903
Bacteroidota
GTG
His
>WENV182426427
OIHQ01000005
351598
Bacteroidota
CGG
Pro
>WENV182426674
OIHQ01008491
291612
Bacteroidota
>WENV182426466
OIHQ01000082
169545
Bacteroidota
TGG
Pro
>WENV182426498
OIHQ01000256
175936
Bacteroidota
CAT
Met
>WENV182426609
OIHQ01003181
21127
Bacteroidota
GGA
Ser
>WENV182426475
OIHQ01000106
175902
Bacteroidota
GGC
Ala
>WENV182426492
OIHQ01000197
480404
Bacteroidota
TTG
Gln
>WENV182426479
OIHQ01000112
280451
Bacteroidota
CGT
Thr
>WENV182426444
OIHQ01000020
99847
Bacteroidota
GTA
Tyr
>WENV182426576
OIHQ01001601
186874
Bacteroidota
CAT
Met
>WENV182426413
OIHQ01000001
488746
Bacteroidota
CTG
Gln
>WENV182426482
OIHQ01000131
399026
Bacteroidota
CCT
Arg
>WENV182426501
OIHQ01000273
20766
Bacteroidota
GGA
Ser
>WENV182426519
OIHQ01000540
175844
Bacteroidota
GGC
Ala
>WENV182426509
OIHQ01000380
280532
Bacteroidota
>WENV182426549
OIHQ01001124
229246
Bacteroidota
GGC
Ala
>WENV182426504
OIHQ01000313
480318
Bacteroidota
CTG
Gln
>WENV182426429
OIHQ01000008
398828
Bacteroidota
CCG
Arg
>WENV182426525
OIHQ01000591
159415
Bacteroidota
TAC
Val
>WENV182426524
OIHQ01000591
159415
Bacteroidota
TAC
Val
>WENV182426490
OIHQ01000190
69204
Bacteroidota
TGA
Ser
>WENV182426499
OIHQ01000266
280446
Bacteroidota
TTT
Lys
>WENV182426417
OIHQ01000002
280446
Bacteroidota
TTT
Lys
>WENV182426416
OIHQ01000001
280446
Bacteroidota
TTT
Lys
>WENV182426536
OIHQ01000812
484496
Bacteroidota
TTG
Gln
>WENV182426428
OIHQ01000007
484496
Bacteroidota
TTG
Gln
>WENV182426483
OIHQ01000140
27502
Bacteroidota
GGA
Ser
>WENV182426437
OIHQ01000014
27502
Bacteroidota
GGA
Ser
>WENV182426559
OIHQ01001240
117804
Bacteroidota
TAG
Leu
>WENV182426531
OIHQ01000739
365112
Bacteroidota
TTT
Lys
>WENV182426511
OIHQ01000419
365112
Bacteroidota
TTT
Lys
>WENV182426534
OIHQ01000777
398836
Bacteroidota
GCA
Cys
>WENV182426506
OIHQ01000362
398836
Bacteroidota
GCA
Cys
>WENV182426470
OIHQ01000096
398836
Bacteroidota
GCA
Cys
>WENV182426419
OIHQ01000002
398836
Bacteroidota
GCA
Cys
>WENV182426518
OIHQ01000537
170323
Bacteroidota
GGG
Pro
>WENV182426415
OIHQ01000001
170323
Bacteroidota
GGG
Pro
>WENV182426495
OIHQ01000205
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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