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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182436123
OIJF01000094
117741
Bacteroidota
TAG
Leu
>WENV182436071
OIJF01000002
398829
Bacteroidota
CCT
Arg
>WENV182436114
OIJF01000072
175838
Bacteroidota
GTT
Asn
>WENV182436214
OIJF01003802
404226
Bacteroidota
CCT
Arg
>WENV182436102
OIJF01000046
289031
Bacteroidota
CAT
Met
>WENV182436104
OIJF01000047
280557
Bacteroidota
CAT
Met
>WENV182436127
OIJF01000117
20206
Bacteroidota
GGA
Ser
>WENV182436116
OIJF01000077
483416
Bacteroidota
CTG
Gln
>WENV182436085
OIJF01000016
56493
Bacteroidota
TGA
Ser
>WENV182436113
OIJF01000068
175903
Bacteroidota
GTG
His
>WENV182436088
OIJF01000028
351598
Bacteroidota
CGG
Pro
>WENV182436210
OIJF01003511
118089
Bacteroidota
TAG
Leu
>WENV182436203
OIJF01003194
175908
Bacteroidota
GTC
Asp
>WENV182436117
OIJF01000079
405877
Bacteroidota
GGT
Thr
>WENV182436265
OIJF01009821
20449
Bacteroidota
GGA
Ser
>WENV182436111
OIJF01000064
21127
Bacteroidota
GGA
Ser
>WENV182436275
OIJF01011726
175886
Bacteroidota
GGC
Ala
>WENV182436074
OIJF01000007
175902
Bacteroidota
GGC
Ala
>WENV182436133
OIJF01000141
280451
Bacteroidota
CGT
Thr
>WENV182436205
OIJF01003448
418894
Bacteroidota
TTC
Glu
>WENV182436313
OIJF01022035
399200
Bacteroidota
CAT
Met
>WENV182436303
OIJF01018506
186874
Bacteroidota
CAT
Met
>WENV182436124
OIJF01000099
488746
Bacteroidota
CTG
Gln
>WENV182436269
OIJF01010973
280478
Bacteroidota
GCC
Gly
>WENV182436273
OIJF01011616
186142
Bacteroidota
GAT
Ile
>WENV182436078
OIJF01000009
398828
Bacteroidota
CCG
Arg
>WENV182436298
OIJF01017182
74084
Bacteroidota
CAG
Leu
>WENV182436167
OIJF01000803
480325
Bacteroidota
CTG
Gln
>WENV182436125
OIJF01000112
69204
Bacteroidota
TGA
Ser
>WENV182436079
OIJF01000010
484496
Bacteroidota
TTG
Gln
>WENV182436130
OIJF01000128
27502
Bacteroidota
GGA
Ser
>WENV182436274
OIJF01011616
186143
Bacteroidota
TGC
Ala
>WENV182436083
OIJF01000014
365112
Bacteroidota
TTT
Lys
>WENV182436134
OIJF01000155
398836
Bacteroidota
GCA
Cys
>WENV182436095
OIJF01000040
170323
Bacteroidota
GGG
Pro
>WENV182436086
OIJF01000017
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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