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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182437429
OIJJ01002426
117741
Bacteroidota
TAG
Leu
>WENV182437389
OIJJ01001160
404226
Bacteroidota
CCT
Arg
>WENV182437436
OIJJ01002470
280557
Bacteroidota
CAT
Met
>WENV182437495
OIJJ01005455
20206
Bacteroidota
GGA
Ser
>WENV182437409
OIJJ01001655
56493
Bacteroidota
TGA
Ser
>WENV182437550
OIJJ01008120
175903
Bacteroidota
GTG
His
>WENV182437426
OIJJ01002359
280451
Bacteroidota
CGT
Thr
>WENV182437482
OIJJ01004795
99847
Bacteroidota
GTA
Tyr
>WENV182437628
OIJJ01022138
158068
Bacteroidota
GGG
Pro
>WENV182437413
OIJJ01001876
484496
Bacteroidota
TTG
Gln
>WENV182437573
OIJJ01011643
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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