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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182440645
OIKA01000774
99852
Bacillota
GTA
Tyr
>WENV182440870
OIKA01023621
405363
Bacillota
GCA
Cys
>WENV182440853
OIKA01020875
290391
Bacillota
TAC
Val
>WENV182440659
OIKA01001214
280428
Bacillota
GAA
Phe
>WENV182440727
OIKA01003879
291579
Bacillota
GAA
Phe
>WENV182440668
OIKA01001441
175842
Bacillota
CAC
Val
>WENV182440842
OIKA01018339
291629
Bacillota
CCA
Trp
>WENV182440634
OIKA01000627
190476
Bacillota
CAT
Met
>WENV182440687
OIKA01002231
280447
Bacillota
GAC
Val
>WENV182440621
OIKA01000441
280447
Bacillota
GAC
Val
>WENV182440605
OIKA01000235
280447
Bacillota
GAC
Val
>WENV182440775
OIKA01010262
186123
Bacillota
GTC
Asp
>WENV182440608
OIKA01000263
280427
Bacillota
TAC
Val
>WENV182440650
OIKA01000897
73009
Bacillota
CAG
Leu
>WENV182440662
OIKA01001269
291581
Bacillota
CGG
Pro
>WENV182440776
OIKA01010262
291634
Bacillota
GAA
Phe
>WENV182440686
OIKA01002098
480322
Bacillota
CTG
Gln
>WENV182440661
OIKA01001269
480322
Bacillota
CTG
Gln
>WENV182440767
OIKA01008960
401685
Bacillota
TTG
Gln
>WENV182440574
OIKA01000076
398854
Bacillota
CTC
Glu
>WENV182440700
OIKA01002559
291576
Bacillota
CCC
Gly
>WENV182440676
OIKA01001614
480324
Bacillota
TTG
Gln
>WENV182440852
OIKA01020875
180688
Bacillota
GTC
Asp
>WENV182440835
OIKA01018173
175899
Bacillota
GTC
Asp
>WENV182440904
OIKA01031971
56079
Bacillota
AAG
Leu
>WENV182440731
OIKA01004150
186051
Bacillota
GAT
Ile
>WENV182440907
OIKA01032900
398857
Bacillota
TTC
Glu
>WENV182440647
OIKA01000780
280444
Bacillota
GGT
Thr
>WENV182440823
OIKA01016746
483485
Bacillota
CCC
Gly
>WENV182440884
OIKA01026755
291597
Bacillota
TGC
Ala
>WENV182440601
OIKA01000219
179755
Bacillota
CCG
Arg
>WENV182440593
OIKA01000146
179755
Bacillota
CCG
Arg
>WENV182440837
OIKA01018173
46835
Bacillota
TAA
Leu
>WENV182440635
OIKA01000627
398832
Bacillota
TTC
Glu
>WENV182440745
OIKA01005213
280476
Bacillota
TTT
Lys
>WENV182440900
OIKA01030862
398852
Bacillota
CTC
Glu
>WENV182440766
OIKA01008960
175857
Bacillota
GTG
His
>WENV182440627
OIKA01000487
398833
Bacillota
TGT
Thr
>WENV182440850
OIKA01020875
285556
Bacillota
TGT
Thr
>WENV182440868
OIKA01023621
175849
Bacillota
GTC
Asp
>WENV182440841
OIKA01018339
405393
Bacillota
GCC
Gly
>WENV182440666
OIKA01001327
280473
Bacillota
TGG
Pro
>WENV182440633
OIKA01000622
280473
Bacillota
TGG
Pro
>WENV182440611
OIKA01000275
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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