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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182441593
OIKD01004955
99852
Bacillota
GTA
Tyr
>WENV182441568
OIKD01002554
349107
Bacillota
GCC
Gly
>WENV182441647
OIKD01011264
405363
Bacillota
GCA
Cys
>WENV182441567
OIKD01002554
280428
Bacillota
GAA
Phe
>WENV182441561
OIKD01002139
175842
Bacillota
CAC
Val
>WENV182441689
OIKD01018954
236579
Bacillota
GAT
Ile
>WENV182441604
OIKD01006193
190476
Bacillota
CAT
Met
>WENV182441679
OIKD01016756
179251
Bacillota
CAT
Met
>WENV182441590
OIKD01004834
280447
Bacillota
GAC
Val
>WENV182441575
OIKD01003249
5692
Bacillota
GCT
Ser
>WENV182441518
OIKD01000254
73009
Bacillota
CAG
Leu
>WENV182441576
OIKD01003338
175859
Bacillota
TCT
Arg
>WENV182441636
OIKD01008760
175831
Bacillota
ACG
Arg
>WENV182441555
OIKD01001843
175868
Bacillota
GTT
Asn
>WENV182441554
OIKD01001843
398854
Bacillota
CTC
Glu
>WENV182441622
OIKD01007468
291576
Bacillota
CCC
Gly
>WENV182441624
OIKD01007537
480324
Bacillota
TTG
Gln
>WENV182441642
OIKD01009565
186051
Bacillota
GAT
Ile
>WENV182441536
OIKD01000932
280444
Bacillota
GGT
Thr
>WENV182441601
OIKD01006119
179755
Bacillota
CCG
Arg
>WENV182441605
OIKD01006193
398832
Bacillota
TTC
Glu
>WENV182441546
OIKD01001492
175915
Bacillota
GTC
Asp
>WENV182441617
OIKD01007083
280483
Bacillota
GAA
Phe
>WENV182441620
OIKD01007387
398833
Bacillota
TGT
Thr
>WENV182441535
OIKD01000932
175849
Bacillota
GTC
Asp
>WENV182441574
OIKD01003249
56074
Bacillota
TGA
Ser
>WENV182441562
OIKD01002417
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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