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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182445120
OIKV01000017
117741
Bacteroidota
TAG
Leu
>WENV182445144
OIKV01000062
175838
Bacteroidota
GTT
Asn
>WENV182445145
OIKV01000062
175838
Bacteroidota
GTT
Asn
>WENV182445138
OIKV01000048
280557
Bacteroidota
CAT
Met
>WENV182445116
OIKV01000014
20206
Bacteroidota
GGA
Ser
>WENV182445121
OIKV01000019
56493
Bacteroidota
TGA
Ser
>WENV182445148
OIKV01000082
175903
Bacteroidota
GTG
His
>WENV182445113
OIKV01000009
351598
Bacteroidota
CGG
Pro
>WENV182445150
OIKV01000107
57807
Bacteroidota
TGA
Ser
>WENV182445123
OIKV01000020
175902
Bacteroidota
GGC
Ala
>WENV182445111
OIKV01000005
280451
Bacteroidota
CGT
Thr
>WENV182445141
OIKV01000059
99847
Bacteroidota
GTA
Tyr
>WENV182445124
OIKV01000021
99847
Bacteroidota
GTA
Tyr
>WENV182445134
OIKV01000040
488746
Bacteroidota
CTG
Gln
>WENV182445110
OIKV01000003
398828
Bacteroidota
CCG
Arg
>WENV182445154
OIKV01000135
140771
Bacteroidota
>WENV182445127
OIKV01000027
280446
Bacteroidota
TTT
Lys
>WENV182445112
OIKV01000007
484496
Bacteroidota
TTG
Gln
>WENV182445139
OIKV01000058
27502
Bacteroidota
GGA
Ser
>WENV182445149
OIKV01000097
398836
Bacteroidota
GCA
Cys
>WENV182445133
OIKV01000040
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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