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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182446594
OILA01007722
176499
Actinomycetota
CAT
Met
>WENV182446696
OILA01025859
283311
Actinomycetota
CCT
Arg
>WENV182446684
OILA01022588
280498
Actinomycetota
GTT
Asn
>WENV182446685
OILA01022588
280498
Actinomycetota
GTT
Asn
>WENV182446602
OILA01008281
316729
Actinomycetota
CAC
Val
>WENV182446458
OILA01000580
59689
Actinomycetota
GGA
Ser
>WENV182446705
OILA01031005
29393
Actinomycetota
GCT
Ser
>WENV182446660
OILA01017536
280524
Actinomycetota
TGC
Ala
>WENV182446542
OILA01003732
398948
Actinomycetota
TTC
Glu
>WENV182446603
OILA01008281
280523
Actinomycetota
GGC
Ala
>WENV182446582
OILA01006270
191955
Actinomycetota
TGT
Thr
>WENV182446686
OILA01022669
20415
Actinomycetota
GAG
Leu
>WENV182446605
OILA01008625
178569
Actinomycetota
CAT
Met
>WENV182446683
OILA01022184
280450
Actinomycetota
TTT
Lys
>WENV182446646
OILA01014061
480329
Actinomycetota
CCC
Gly
>WENV182446672
OILA01020566
104211
Actinomycetota
CAG
Leu
>WENV182446593
OILA01007722
117903
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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