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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182448830
OILN01000001
175904
Bacteroidota
CGG
Pro
>WENV182448870
OILN01000027
118089
Bacteroidota
TAG
Leu
>WENV182448836
OILN01000002
203954
Bacteroidota
GTC
Asp
>WENV182448862
OILN01000022
203954
Bacteroidota
GTC
Asp
>WENV182448893
OILN01000063
20449
Bacteroidota
GGA
Ser
>WENV182448848
OILN01000013
399200
Bacteroidota
CAT
Met
>WENV182448849
OILN01000013
399200
Bacteroidota
CAT
Met
>WENV182448881
OILN01000035
280478
Bacteroidota
GCC
Gly
>WENV182448879
OILN01000035
280478
Bacteroidota
GCC
Gly
>WENV182448853
OILN01000018
280478
Bacteroidota
GCC
Gly
>WENV182448843
OILN01000009
176192
Bacteroidota
TCT
Arg
>WENV182448859
OILN01000020
400088
Bacteroidota
GGT
Thr
>WENV182448911
OILN01000118
285750
Bacteroidota
CCC
Gly
>WENV182448889
OILN01000055
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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