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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182449791
OILT01000228
117741
Bacteroidota
TAG
Leu
>WENV182449759
OILT01000060
175838
Bacteroidota
GTT
Asn
>WENV182449741
OILT01000014
400161
Bacteroidota
GGT
Thr
>WENV182449831
OILT01000535
289031
Bacteroidota
CAT
Met
>WENV182449774
OILT01000129
156422
Bacteroidota
TAC
Val
>WENV182449767
OILT01000091
280557
Bacteroidota
CAT
Met
>WENV182449775
OILT01000144
20206
Bacteroidota
GGA
Ser
>WENV182449965
OILT01005901
282712
Bacteroidota
TTT
Lys
>WENV182449776
OILT01000147
118221
Bacteroidota
CAA
Leu
>WENV182449784
OILT01000192
56493
Bacteroidota
TGA
Ser
>WENV182449769
OILT01000103
175903
Bacteroidota
GTG
His
>WENV182449996
OILT01008547
118089
Bacteroidota
TAG
Leu
>WENV182449937
OILT01003583
175908
Bacteroidota
GTC
Asp
>WENV182449963
OILT01005767
280530
Bacteroidota
CCA
Trp
>WENV182449749
OILT01000021
56385
Bacteroidota
TGA
Ser
>WENV182449981
OILT01007070
20449
Bacteroidota
GGA
Ser
>WENV182450060
OILT01016890
21127
Bacteroidota
GGA
Ser
>WENV182449788
OILT01000210
56072
Bacteroidota
TAA
Leu
>WENV182449782
OILT01000176
57807
Bacteroidota
TGA
Ser
>WENV182449772
OILT01000108
175902
Bacteroidota
GGC
Ala
>WENV182450030
OILT01012044
179697
Bacteroidota
TGT
Thr
>WENV182450081
OILT01021326
280451
Bacteroidota
CGT
Thr
>WENV182449790
OILT01000225
99847
Bacteroidota
GTA
Tyr
>WENV182450031
OILT01012251
399200
Bacteroidota
CAT
Met
>WENV182449757
OILT01000051
404109
Bacteroidota
CTC
Glu
>WENV182449882
OILT01001277
186874
Bacteroidota
CAT
Met
>WENV182449735
OILT01000002
46648
Bacteroidota
TAA
Leu
>WENV182449806
OILT01000294
187814
Bacteroidota
GTC
Asp
>WENV182449747
OILT01000018
187814
Bacteroidota
GTC
Asp
>WENV182449771
OILT01000105
398828
Bacteroidota
CCG
Arg
>WENV182449734
OILT01000002
481328
Bacteroidota
TTG
Gln
>WENV182450029
OILT01011650
400088
Bacteroidota
GGT
Thr
>WENV182449753
OILT01000035
280446
Bacteroidota
TTT
Lys
>WENV182449933
OILT01003442
484496
Bacteroidota
TTG
Gln
>WENV182450048
OILT01015401
285750
Bacteroidota
CCC
Gly
>WENV182450071
OILT01020229
186143
Bacteroidota
TGC
Ala
>WENV182449957
OILT01005431
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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