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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182450124
OILU01000015
117741
Bacteroidota
TAG
Leu
>WENV182450146
OILU01000062
175838
Bacteroidota
GTT
Asn
>WENV182450147
OILU01000065
175838
Bacteroidota
GTT
Asn
>WENV182450140
OILU01000046
280557
Bacteroidota
CAT
Met
>WENV182450125
OILU01000016
20206
Bacteroidota
GGA
Ser
>WENV182450113
OILU01000001
201819
Bacteroidota
CAT
Met
>WENV182450122
OILU01000012
56493
Bacteroidota
TGA
Ser
>WENV182450151
OILU01000084
175903
Bacteroidota
GTG
His
>WENV182450153
OILU01000095
57807
Bacteroidota
TGA
Ser
>WENV182450117
OILU01000007
280451
Bacteroidota
CGT
Thr
>WENV182450143
OILU01000062
99847
Bacteroidota
GTA
Tyr
>WENV182450127
OILU01000018
99847
Bacteroidota
GTA
Tyr
>WENV182450137
OILU01000041
488746
Bacteroidota
CTG
Gln
>WENV182450138
OILU01000041
158068
Bacteroidota
GGG
Pro
>WENV182450115
OILU01000001
398828
Bacteroidota
CCG
Arg
>WENV182450133
OILU01000031
280446
Bacteroidota
TTT
Lys
>WENV182450118
OILU01000008
484496
Bacteroidota
TTG
Gln
>WENV182450135
OILU01000033
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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