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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182451471
OIMA01000094
117741
Bacteroidota
TAG
Leu
>WENV182451417
OIMA01000001
398829
Bacteroidota
CCT
Arg
>WENV182451437
OIMA01000017
175838
Bacteroidota
GTT
Asn
>WENV182451590
OIMA01007030
404226
Bacteroidota
CCT
Arg
>WENV182451420
OIMA01000002
289031
Bacteroidota
CAT
Met
>WENV182451436
OIMA01000017
280557
Bacteroidota
CAT
Met
>WENV182451452
OIMA01000044
20206
Bacteroidota
GGA
Ser
>WENV182451445
OIMA01000029
483416
Bacteroidota
CTG
Gln
>WENV182451472
OIMA01000101
201819
Bacteroidota
CAT
Met
>WENV182451432
OIMA01000011
56493
Bacteroidota
TGA
Ser
>WENV182451465
OIMA01000073
175903
Bacteroidota
GTG
His
>WENV182451450
OIMA01000043
351598
Bacteroidota
CGG
Pro
>WENV182451429
OIMA01000007
405877
Bacteroidota
GGT
Thr
>WENV182451610
OIMA01009128
20449
Bacteroidota
GGA
Ser
>WENV182451458
OIMA01000056
21127
Bacteroidota
GGA
Ser
>WENV182451455
OIMA01000051
175902
Bacteroidota
GGC
Ala
>WENV182451442
OIMA01000024
280451
Bacteroidota
CGT
Thr
>WENV182451598
OIMA01007381
418894
Bacteroidota
TTC
Glu
>WENV182451426
OIMA01000006
99847
Bacteroidota
GTA
Tyr
>WENV182451583
OIMA01006292
399200
Bacteroidota
CAT
Met
>WENV182451500
OIMA01000269
186874
Bacteroidota
CAT
Met
>WENV182451451
OIMA01000044
488746
Bacteroidota
CTG
Gln
>WENV182451416
OIMA01000001
280478
Bacteroidota
GCC
Gly
>WENV182451431
OIMA01000010
398828
Bacteroidota
CCG
Arg
>WENV182451509
OIMA01000675
74084
Bacteroidota
CAG
Leu
>WENV182451553
OIMA01003199
176192
Bacteroidota
TCT
Arg
>WENV182451475
OIMA01000110
69204
Bacteroidota
TGA
Ser
>WENV182451422
OIMA01000003
280446
Bacteroidota
TTT
Lys
>WENV182451447
OIMA01000032
484496
Bacteroidota
TTG
Gln
>WENV182451480
OIMA01000134
27502
Bacteroidota
GGA
Ser
>WENV182451428
OIMA01000006
365112
Bacteroidota
TTT
Lys
>WENV182451485
OIMA01000162
398836
Bacteroidota
GCA
Cys
>WENV182451443
OIMA01000025
170323
Bacteroidota
GGG
Pro
>WENV182451440
OIMA01000019
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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