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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182453068
OIMG01000103
117741
Bacteroidota
TAG
Leu
>WENV182453041
OIMG01000014
398829
Bacteroidota
CCT
Arg
>WENV182453075
OIMG01000225
175838
Bacteroidota
GTT
Asn
>WENV182453070
OIMG01000123
280557
Bacteroidota
CAT
Met
>WENV182453049
OIMG01000029
20206
Bacteroidota
GGA
Ser
>WENV182453071
OIMG01000140
201819
Bacteroidota
CAT
Met
>WENV182453084
OIMG01000442
175903
Bacteroidota
GTG
His
>WENV182453050
OIMG01000031
57807
Bacteroidota
TGA
Ser
>WENV182453079
OIMG01000331
175902
Bacteroidota
GGC
Ala
>WENV182453076
OIMG01000242
280451
Bacteroidota
CGT
Thr
>WENV182453040
OIMG01000007
99847
Bacteroidota
GTA
Tyr
>WENV182453037
OIMG01000002
488746
Bacteroidota
CTG
Gln
>WENV182453038
OIMG01000002
158068
Bacteroidota
GGG
Pro
>WENV182453053
OIMG01000039
398828
Bacteroidota
CCG
Arg
>WENV182453039
OIMG01000005
484496
Bacteroidota
TTG
Gln
>WENV182453093
OIMG01000984
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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