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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182453401
OIMI01007134
343590
Bacillota
GCC
Gly
>WENV182453308
OIMI01002009
349107
Bacillota
GCC
Gly
>WENV182453331
OIMI01002717
349107
Bacillota
GCC
Gly
>WENV182453309
OIMI01002009
405363
Bacillota
GCA
Cys
>WENV182453330
OIMI01002717
280428
Bacillota
GAA
Phe
>WENV182453349
OIMI01003633
141454
Bacillota
TAG
Leu
>WENV182453296
OIMI01001488
280492
Bacillota
CTT
Lys
>WENV182453210
OIMI01000301
280492
Bacillota
CTT
Lys
>WENV182453345
OIMI01003415
175842
Bacillota
CAC
Val
>WENV182453351
OIMI01003679
179176
Bacillota
ACG
Arg
>WENV182453206
OIMI01000285
190476
Bacillota
CAT
Met
>WENV182453250
OIMI01000539
73664
Bacillota
CAG
Leu
>WENV182453173
OIMI01000026
73664
Bacillota
CAG
Leu
>WENV182453209
OIMI01000292
280447
Bacillota
GAC
Val
>WENV182453192
OIMI01000180
5692
Bacillota
GCT
Ser
>WENV182453323
OIMI01002626
73009
Bacillota
CAG
Leu
>WENV182453314
OIMI01002279
280646
Bacillota
TGC
Ala
>WENV182453197
OIMI01000208
291581
Bacillota
CGG
Pro
>WENV182453223
OIMI01000383
175859
Bacillota
TCT
Arg
>WENV182453186
OIMI01000091
175831
Bacillota
ACG
Arg
>WENV182453228
OIMI01000445
179810
Bacillota
TCT
Arg
>WENV182453300
OIMI01001530
27216
Bacillota
GCT
Ser
>WENV182453196
OIMI01000208
480322
Bacillota
CTG
Gln
>WENV182453372
OIMI01004732
187364
Bacillota
CAT
Met
>WENV182453279
OIMI01001171
175868
Bacillota
GTT
Asn
>WENV182453261
OIMI01000755
175868
Bacillota
GTT
Asn
>WENV182453278
OIMI01001171
398854
Bacillota
CTC
Glu
>WENV182453222
OIMI01000372
291576
Bacillota
CCC
Gly
>WENV182453187
OIMI01000110
480324
Bacillota
TTG
Gln
>WENV182453205
OIMI01000277
497729
Bacillota
CCA
Trp
>WENV182453212
OIMI01000320
56079
Bacillota
AAG
Leu
>WENV182453377
OIMI01005318
323864
Bacillota
TGC
Ala
>WENV182453232
OIMI01000449
117745
Bacillota
GTA
Tyr
>WENV182453361
OIMI01004124
280444
Bacillota
GGT
Thr
>WENV182453276
OIMI01001135
483485
Bacillota
CCC
Gly
>WENV182453326
OIMI01002665
46643
Bacillota
TGA
Ser
>WENV182453177
OIMI01000038
179755
Bacillota
CCG
Arg
>WENV182453473
OIMI01016749
46835
Bacillota
TAA
Leu
>WENV182453207
OIMI01000285
398832
Bacillota
TTC
Glu
>WENV182453178
OIMI01000043
118669
Bacillota
GTA
Tyr
>WENV182453213
OIMI01000351
280462
Bacillota
GAA
Phe
>WENV182453303
OIMI01001850
398852
Bacillota
CTC
Glu
>WENV182453302
OIMI01001783
398852
Bacillota
CTC
Glu
>WENV182453201
OIMI01000247
398852
Bacillota
CTC
Glu
>WENV182453164
OIMI01000004
398852
Bacillota
CTC
Glu
>WENV182453163
OIMI01000004
398852
Bacillota
CTC
Glu
>WENV182453162
OIMI01000004
398852
Bacillota
CTC
Glu
>WENV182453218
OIMI01000364
280483
Bacillota
GAA
Phe
>WENV182453229
OIMI01000445
175857
Bacillota
GTG
His
>WENV182453219
OIMI01000364
285756
Bacillota
GCC
Gly
>WENV182453195
OIMI01000199
398833
Bacillota
TGT
Thr
>WENV182453437
OIMI01009959
175849
Bacillota
GTC
Asp
>WENV182453214
OIMI01000351
280463
Bacillota
TTT
Lys
>WENV182453191
OIMI01000180
56074
Bacillota
TGA
Ser
>WENV182453317
OIMI01002361
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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