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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182454779
OIMN01001362
280557
Bacteroidota
CAT
Met
>WENV182454705
OIMN01000212
20206
Bacteroidota
GGA
Ser
>WENV182454787
OIMN01001702
175903
Bacteroidota
GTG
His
>WENV182454678
OIMN01000072
351598
Bacteroidota
CGG
Pro
>WENV182454747
OIMN01000484
56072
Bacteroidota
TAA
Leu
>WENV182454768
OIMN01001068
175902
Bacteroidota
GGC
Ala
>WENV182454765
OIMN01000950
280451
Bacteroidota
CGT
Thr
>WENV182454882
OIMN01010197
99847
Bacteroidota
GTA
Tyr
>WENV182454881
OIMN01009985
186874
Bacteroidota
CAT
Met
>WENV182454793
OIMN01001837
488746
Bacteroidota
CTG
Gln
>WENV182454687
OIMN01000137
27524
Bacteroidota
GGA
Ser
>WENV182454906
OIMN01014042
186108
Bacteroidota
GTT
Asn
>WENV182454875
OIMN01008887
280515
Bacteroidota
CCA
Trp
>WENV182454864
OIMN01007533
398828
Bacteroidota
CCG
Arg
>WENV182454806
OIMN01002374
69204
Bacteroidota
TGA
Ser
>WENV182454701
OIMN01000198
484496
Bacteroidota
TTG
Gln
>WENV182454767
OIMN01001035
27502
Bacteroidota
GGA
Ser
>WENV182454819
OIMN01002833
365112
Bacteroidota
TTT
Lys
>WENV182454771
OIMN01001202
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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