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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182455528
OIMQ01002589
172207
Bacteroidota
GGG
Pro
>WENV182455517
OIMQ01000456
280557
Bacteroidota
CAT
Met
>WENV182455512
OIMQ01000169
175936
Bacteroidota
CAT
Met
>WENV182455545
OIMQ01005029
398860
Bacteroidota
CTC
Glu
>WENV182455532
OIMQ01002800
480404
Bacteroidota
TTG
Gln
>WENV182455535
OIMQ01002953
99847
Bacteroidota
GTA
Tyr
>WENV182455514
OIMQ01000190
399026
Bacteroidota
CCT
Arg
>WENV182455539
OIMQ01003805
229246
Bacteroidota
GGC
Ala
>WENV182455518
OIMQ01000900
280446
Bacteroidota
TTT
Lys
>WENV182455538
OIMQ01003577
27502
Bacteroidota
GGA
Ser
>WENV182455510
OIMQ01000113
117804
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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