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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182457385
OINE01000001
175904
Bacteroidota
CGG
Pro
>WENV182457420
OINE01000021
118089
Bacteroidota
TAG
Leu
>WENV182457391
OINE01000001
203954
Bacteroidota
GTC
Asp
>WENV182457393
OINE01000002
203954
Bacteroidota
GTC
Asp
>WENV182457450
OINE01000094
20449
Bacteroidota
GGA
Ser
>WENV182457415
OINE01000013
399200
Bacteroidota
CAT
Met
>WENV182457416
OINE01000013
399200
Bacteroidota
CAT
Met
>WENV182457441
OINE01000055
280478
Bacteroidota
GCC
Gly
>WENV182457439
OINE01000055
280478
Bacteroidota
GCC
Gly
>WENV182457399
OINE01000005
280478
Bacteroidota
GCC
Gly
>WENV182457403
OINE01000008
176192
Bacteroidota
TCT
Arg
>WENV182457407
OINE01000009
400088
Bacteroidota
GGT
Thr
>WENV182457453
OINE01000106
285750
Bacteroidota
CCC
Gly
>WENV182457428
OINE01000037
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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