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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182460176
OINO01000256
117741
Bacteroidota
TAG
Leu
>WENV182460245
OINO01001230
398829
Bacteroidota
CCT
Arg
>WENV182460116
OINO01000028
175838
Bacteroidota
GTT
Asn
>WENV182460301
OINO01004029
175904
Bacteroidota
CGG
Pro
>WENV182460102
OINO01000006
400161
Bacteroidota
GGT
Thr
>WENV182460138
OINO01000101
280557
Bacteroidota
CAT
Met
>WENV182460133
OINO01000080
20206
Bacteroidota
GGA
Ser
>WENV182460141
OINO01000135
118221
Bacteroidota
CAA
Leu
>WENV182460244
OINO01001207
56493
Bacteroidota
TGA
Ser
>WENV182460127
OINO01000059
175903
Bacteroidota
GTG
His
>WENV182460240
OINO01001120
351598
Bacteroidota
CGG
Pro
>WENV182460285
OINO01002521
118089
Bacteroidota
TAG
Leu
>WENV182460474
OINO01028233
203954
Bacteroidota
GTC
Asp
>WENV182460114
OINO01000025
56385
Bacteroidota
TGA
Ser
>WENV182460398
OINO01014808
20449
Bacteroidota
GGA
Ser
>WENV182460103
OINO01000006
312035
Bacteroidota
CCA
Trp
>WENV182460193
OINO01000338
242241
Bacteroidota
GTC
Asp
>WENV182460220
OINO01000626
242241
Bacteroidota
GTC
Asp
>WENV182460194
OINO01000343
57807
Bacteroidota
TGA
Ser
>WENV182460139
OINO01000112
175902
Bacteroidota
GGC
Ala
>WENV182460128
OINO01000064
280451
Bacteroidota
CGT
Thr
>WENV182460385
OINO01013433
418894
Bacteroidota
TTC
Glu
>WENV182460126
OINO01000057
99847
Bacteroidota
GTA
Tyr
>WENV182460258
OINO01001737
399200
Bacteroidota
CAT
Met
>WENV182460123
OINO01000050
404109
Bacteroidota
CTC
Glu
>WENV182460099
OINO01000004
46648
Bacteroidota
TAA
Leu
>WENV182460148
OINO01000191
332896
Bacteroidota
TTT
Lys
>WENV182460177
OINO01000263
488746
Bacteroidota
CTG
Gln
>WENV182460270
OINO01002097
280478
Bacteroidota
GCC
Gly
>WENV182460117
OINO01000029
158068
Bacteroidota
GGG
Pro
>WENV182460107
OINO01000016
398828
Bacteroidota
CCG
Arg
>WENV182460439
OINO01020116
74084
Bacteroidota
CAG
Leu
>WENV182460267
OINO01001965
176192
Bacteroidota
TCT
Arg
>WENV182460210
OINO01000477
481328
Bacteroidota
TTG
Gln
>WENV182460235
OINO01000965
280446
Bacteroidota
TTT
Lys
>WENV182460278
OINO01002290
484496
Bacteroidota
TTG
Gln
>WENV182460124
OINO01000055
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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