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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182462619
OINY01019616
290391
Bacillota
TAC
Val
>WENV182462431
OINY01001524
280428
Bacillota
GAA
Phe
>WENV182462471
OINY01002588
291579
Bacillota
GAA
Phe
>WENV182462580
OINY01011274
280492
Bacillota
CTT
Lys
>WENV182462304
OINY01000056
175842
Bacillota
CAC
Val
>WENV182462612
OINY01017233
291629
Bacillota
CCA
Trp
>WENV182462590
OINY01013353
184497
Bacillota
GGG
Pro
>WENV182462517
OINY01005854
190476
Bacillota
CAT
Met
>WENV182462396
OINY01000714
280447
Bacillota
GAC
Val
>WENV182462425
OINY01001370
5692
Bacillota
GCT
Ser
>WENV182462488
OINY01003995
186123
Bacillota
GTC
Asp
>WENV182462654
OINY01028763
481217
Bacillota
GCA
Cys
>WENV182462477
OINY01002842
291581
Bacillota
CGG
Pro
>WENV182462398
OINY01000746
175859
Bacillota
TCT
Arg
>WENV182462484
OINY01003726
175831
Bacillota
ACG
Arg
>WENV182462489
OINY01003995
291634
Bacillota
GAA
Phe
>WENV182462476
OINY01002842
480322
Bacillota
CTG
Gln
>WENV182462362
OINY01000274
175868
Bacillota
GTT
Asn
>WENV182462361
OINY01000274
398854
Bacillota
CTC
Glu
>WENV182462600
OINY01015351
291576
Bacillota
CCC
Gly
>WENV182462402
OINY01000822
480324
Bacillota
TTG
Gln
>WENV182462613
OINY01018062
73638
Bacillota
AAG
Leu
>WENV182462594
OINY01014498
56079
Bacillota
AAG
Leu
>WENV182462509
OINY01004983
186051
Bacillota
GAT
Ile
>WENV182462629
OINY01021315
398857
Bacillota
TTC
Glu
>WENV182462609
OINY01017145
117745
Bacillota
GTA
Tyr
>WENV182462496
OINY01004144
281076
Bacillota
CCA
Trp
>WENV182462393
OINY01000671
179755
Bacillota
CCG
Arg
>WENV182462459
OINY01002208
291650
Bacillota
TGC
Ala
>WENV182462544
OINY01006759
46835
Bacillota
TAA
Leu
>WENV182462518
OINY01005854
398832
Bacillota
TTC
Glu
>WENV182462542
OINY01006759
175915
Bacillota
GTC
Asp
>WENV182462521
OINY01005928
280476
Bacillota
TTT
Lys
>WENV182462465
OINY01002395
289123
Bacillota
GGT
Thr
>WENV182462336
OINY01000182
398833
Bacillota
TGT
Thr
>WENV182462620
OINY01019616
285556
Bacillota
TGT
Thr
>WENV182462611
OINY01017233
405393
Bacillota
GCC
Gly
>WENV182462605
OINY01015949
56074
Bacillota
TGA
Ser
>WENV182462381
OINY01000588
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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