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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182463661
OIOF01000056
117741
Bacteroidota
TAG
Leu
>WENV182463657
OIOF01000026
398829
Bacteroidota
CCT
Arg
>WENV182463666
OIOF01000110
175838
Bacteroidota
GTT
Asn
>WENV182463757
OIOF01004805
282852
Bacteroidota
TTT
Lys
>WENV182463664
OIOF01000093
280557
Bacteroidota
CAT
Met
>WENV182463668
OIOF01000194
201819
Bacteroidota
CAT
Met
>WENV182463721
OIOF01001675
175903
Bacteroidota
GTG
His
>WENV182463681
OIOF01000371
351598
Bacteroidota
CGG
Pro
>WENV182463739
OIOF01003272
57807
Bacteroidota
TGA
Ser
>WENV182463676
OIOF01000315
175902
Bacteroidota
GGC
Ala
>WENV182463677
OIOF01000318
280451
Bacteroidota
CGT
Thr
>WENV182463670
OIOF01000198
99847
Bacteroidota
GTA
Tyr
>WENV182463659
OIOF01000034
488746
Bacteroidota
CTG
Gln
>WENV182463748
OIOF01003628
158068
Bacteroidota
GGG
Pro
>WENV182463662
OIOF01000068
398828
Bacteroidota
CCG
Arg
>WENV182463672
OIOF01000232
140771
Bacteroidota
>WENV182463680
OIOF01000337
491385
Bacteroidota
TTG
Gln
>WENV182463750
OIOF01004334
280446
Bacteroidota
TTT
Lys
>WENV182463658
OIOF01000030
484496
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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