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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182469318
OIPD01001408
175838
Bacteroidota
GTT
Asn
>WENV182469486
OIPD01017275
289031
Bacteroidota
CAT
Met
>WENV182469198
OIPD01000032
280557
Bacteroidota
CAT
Met
>WENV182469286
OIPD01000655
20206
Bacteroidota
GGA
Ser
>WENV182469523
OIPD01025352
483416
Bacteroidota
CTG
Gln
>WENV182469391
OIPD01007088
175903
Bacteroidota
GTG
His
>WENV182469506
OIPD01020676
57807
Bacteroidota
TGA
Ser
>WENV182469354
OIPD01003748
175902
Bacteroidota
GGC
Ala
>WENV182469410
OIPD01009080
280451
Bacteroidota
CGT
Thr
>WENV182469307
OIPD01000820
99847
Bacteroidota
GTA
Tyr
>WENV182469290
OIPD01000685
332896
Bacteroidota
TTT
Lys
>WENV182469284
OIPD01000640
488746
Bacteroidota
CTG
Gln
>WENV182469551
OIPD01031617
175844
Bacteroidota
GGC
Ala
>WENV182469208
OIPD01000048
158068
Bacteroidota
GGG
Pro
>WENV182469260
OIPD01000358
398828
Bacteroidota
CCG
Arg
>WENV182469241
OIPD01000160
176192
Bacteroidota
TCT
Arg
>WENV182469230
OIPD01000090
280446
Bacteroidota
TTT
Lys
>WENV182469275
OIPD01000508
484496
Bacteroidota
TTG
Gln
>WENV182469233
OIPD01000104
484496
Bacteroidota
TTG
Gln
>WENV182469214
OIPD01000051
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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