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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182469888
OIPE01018212
280500
Bacillota
TGC
Ala
>WENV182469729
OIPE01002515
290391
Bacillota
TAC
Val
>WENV182469580
OIPE01000012
280428
Bacillota
GAA
Phe
>WENV182469751
OIPE01003332
291579
Bacillota
GAA
Phe
>WENV182469750
OIPE01003332
179917
Bacillota
CAT
Met
>WENV182469916
OIPE01028070
280492
Bacillota
CTT
Lys
>WENV182469649
OIPE01000284
175842
Bacillota
CAC
Val
>WENV182469869
OIPE01016077
184497
Bacillota
GGG
Pro
>WENV182469910
OIPE01023447
179176
Bacillota
ACG
Arg
>WENV182469745
OIPE01003208
280447
Bacillota
GAC
Val
>WENV182469697
OIPE01001686
280447
Bacillota
GAC
Val
>WENV182469721
OIPE01002399
186123
Bacillota
GTC
Asp
>WENV182469578
OIPE01000012
280427
Bacillota
TAC
Val
>WENV182469647
OIPE01000280
73009
Bacillota
CAG
Leu
>WENV182469662
OIPE01000625
291581
Bacillota
CGG
Pro
>WENV182469677
OIPE01000901
175831
Bacillota
ACG
Arg
>WENV182469786
OIPE01005537
332181
Bacillota
TGT
Thr
>WENV182469722
OIPE01002399
291634
Bacillota
GAA
Phe
>WENV182469654
OIPE01000321
480322
Bacillota
CTG
Gln
>WENV182469801
OIPE01007074
401685
Bacillota
TTG
Gln
>WENV182469712
OIPE01002305
175868
Bacillota
GTT
Asn
>WENV182469706
OIPE01001894
175868
Bacillota
GTT
Asn
>WENV182469711
OIPE01002305
398854
Bacillota
CTC
Glu
>WENV182469684
OIPE01001036
291576
Bacillota
CCC
Gly
>WENV182469708
OIPE01002039
480324
Bacillota
TTG
Gln
>WENV182469678
OIPE01000903
480324
Bacillota
TTG
Gln
>WENV182469761
OIPE01003938
497729
Bacillota
CCA
Trp
>WENV182469728
OIPE01002515
180688
Bacillota
GTC
Asp
>WENV182469873
OIPE01016824
332891
Bacillota
TGC
Ala
>WENV182469748
OIPE01003332
398857
Bacillota
TTC
Glu
>WENV182469670
OIPE01000787
280444
Bacillota
GGT
Thr
>WENV182469668
OIPE01000787
280444
Bacillota
GGT
Thr
>WENV182469832
OIPE01011388
291597
Bacillota
TGC
Ala
>WENV182469692
OIPE01001283
179755
Bacillota
CCG
Arg
>WENV182469666
OIPE01000757
179755
Bacillota
CCG
Arg
>WENV182469658
OIPE01000393
179755
Bacillota
CCG
Arg
>WENV182469892
OIPE01018708
58120
Bacillota
AAG
Leu
>WENV182469851
OIPE01014394
398852
Bacillota
CTC
Glu
>WENV182469800
OIPE01007074
175857
Bacillota
GTG
His
>WENV182469736
OIPE01002901
398833
Bacillota
TGT
Thr
>WENV182469726
OIPE01002515
285556
Bacillota
TGT
Thr
>WENV182469669
OIPE01000787
175849
Bacillota
GTC
Asp
>WENV182469845
OIPE01014007
405393
Bacillota
GCC
Gly
>WENV182469777
OIPE01004922
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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