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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182471340
OIPK01000946
280557
Bacteroidota
CAT
Met
>WENV182471329
OIPK01000210
20206
Bacteroidota
GGA
Ser
>WENV182471354
OIPK01003050
398872
Bacteroidota
GGT
Thr
>WENV182471335
OIPK01000603
175936
Bacteroidota
CAT
Met
>WENV182471365
OIPK01004628
57807
Bacteroidota
TGA
Ser
>WENV182471338
OIPK01000823
480404
Bacteroidota
TTG
Gln
>WENV182471336
OIPK01000608
99847
Bacteroidota
GTA
Tyr
>WENV182471337
OIPK01000822
332896
Bacteroidota
TTT
Lys
>WENV182471356
OIPK01003261
280532
Bacteroidota
>WENV182471364
OIPK01004398
158068
Bacteroidota
GGG
Pro
>WENV182471366
OIPK01005008
484496
Bacteroidota
TTG
Gln
>WENV182471350
OIPK01002389
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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