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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182471834
OIPM01015330
176499
Actinomycetota
CAT
Met
>WENV182471823
OIPM01012764
140768
Actinomycetota
TAG
Leu
>WENV182471762
OIPM01005656
56384
Actinomycetota
TGA
Ser
>WENV182471869
OIPM01023392
59689
Actinomycetota
GGA
Ser
>WENV182471849
OIPM01018593
380862
Actinomycetota
CAC
Val
>WENV182471845
OIPM01017582
24925
Actinomycetota
GCT
Ser
>WENV182471863
OIPM01021808
280524
Actinomycetota
TGC
Ala
>WENV182471861
OIPM01021555
175841
Actinomycetota
TAT
Ile
>WENV182471831
OIPM01014726
480329
Actinomycetota
CCC
Gly
>WENV182471846
OIPM01017747
20209
Actinomycetota
GAG
Leu
>WENV182471819
OIPM01012552
480319
Actinomycetota
TTG
Gln
>WENV182471841
OIPM01016411
280499
Actinomycetota
CCT
Arg
>WENV182471745
OIPM01003585
398853
Actinomycetota
CTG
Gln
>WENV182471840
OIPM01016343
46642
Actinomycetota
CGA
Ser
>WENV182471862
OIPM01021808
179238
Actinomycetota
GAT
Ile
>WENV182471822
OIPM01012764
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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